Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TPM1P09493 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TPM1P09493 RNU1-140P-201ENST00000365040 165 ntBASIC2.85□□□□□ -1.95
TPM1P09493 AL158825.1-201ENST00000414735 521 ntBASIC2.85□□□□□ -1.95
TPM1P09493 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.85□□□□□ -1.95
TPM1P09493 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
TPM1P09493 RPL35AP12-201ENST00000425362 338 ntBASIC2.85□□□□□ -1.95
TPM1P09493 YME1L1P1-201ENST00000429435 297 ntBASIC2.85□□□□□ -1.95
TPM1P09493 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
TPM1P09493 AC011816.1-201ENST00000441346 546 ntBASIC2.85□□□□□ -1.95
TPM1P09493 CACYBPP2-201ENST00000453625 678 ntBASIC2.85□□□□□ -1.95
TPM1P09493 AC092798.1-201ENST00000458542 409 ntBASIC2.85□□□□□ -1.95
TPM1P09493 AC006390.1-201ENST00000508068 283 ntBASIC2.85□□□□□ -1.95
TPM1P09493 CDC42P4-201ENST00000510507 563 ntBASIC2.85□□□□□ -1.95
TPM1P09493 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.85□□□□□ -1.95
TPM1P09493 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.85□□□□□ -1.95
TPM1P09493 CASP1P1-201ENST00000526345 212 ntBASIC2.85□□□□□ -1.95
TPM1P09493 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.85□□□□□ -1.95
TPM1P09493 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.85□□□□□ -1.95
TPM1P09493 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.85□□□□□ -1.95
TPM1P09493 AC011890.2-201ENST00000613393 294 ntBASIC2.85□□□□□ -1.95
TPM1P09493 AC244100.1-202ENST00000621554 382 ntBASIC2.85□□□□□ -1.95
TPM1P09493 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.85□□□□□ -1.95
TPM1P09493 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TPM1P09493 RNU6-1155P-201ENST00000363554 107 ntBASIC2.84□□□□□ -1.95
TPM1P09493 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.84□□□□□ -1.95
TPM1P09493 AC083799.1-201ENST00000366451 910 ntBASIC2.84□□□□□ -1.95
TPM1P09493 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.84□□□□□ -1.95
TPM1P09493 RNU6-198P-201ENST00000384258 104 ntBASIC2.84□□□□□ -1.95
TPM1P09493 MIR34B-201ENST00000385076 84 ntBASIC2.84□□□□□ -1.95
TPM1P09493 AL024474.1-201ENST00000404655 591 ntBASIC2.84□□□□□ -1.95
TPM1P09493 ATF1P1-201ENST00000406040 927 ntBASIC2.84□□□□□ -1.95
TPM1P09493 AL024507.1-201ENST00000412741 274 ntBASIC2.84□□□□□ -1.95
TPM1P09493 MORF4L1P7-201ENST00000426038 703 ntBASIC2.84□□□□□ -1.95
TPM1P09493 SUMO1P4-201ENST00000429430 302 ntBASIC2.84□□□□□ -1.95
TPM1P09493 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.84□□□□□ -1.95
TPM1P09493 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.84□□□□□ -1.95
TPM1P09493 AC087499.2-201ENST00000432861 149 ntBASIC2.84□□□□□ -1.95
TPM1P09493 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.84□□□□□ -1.95
TPM1P09493 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.84□□□□□ -1.95
TPM1P09493 RNF2P1-201ENST00000442955 1010 ntBASIC2.84□□□□□ -1.95
TPM1P09493 HSFY3P-201ENST00000444242 1191 ntBASIC2.84□□□□□ -1.95
TPM1P09493 AC005002.1-201ENST00000447458 540 ntBASIC2.84□□□□□ -1.95
TPM1P09493 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.84□□□□□ -1.95
TPM1P09493 PNPLA4P1-201ENST00000458328 305 ntBASIC2.84□□□□□ -1.95
TPM1P09493 AP001992.1-205ENST00000462248 379 ntBASIC2.84□□□□□ -1.95
TPM1P09493 OR5BM1P-201ENST00000512021 366 ntBASIC2.84□□□□□ -1.95
TPM1P09493 AC010374.2-201ENST00000512933 535 ntBASIC2.84□□□□□ -1.95
TPM1P09493 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.84□□□□□ -1.95
TPM1P09493 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.84□□□□□ -1.95
TPM1P09493 AL035413.2-201ENST00000604801 525 ntBASIC2.84□□□□□ -1.95
TPM1P09493 AP000254.1-201ENST00000609934 520 ntBASIC2.84□□□□□ -1.95
TPM1P09493 AL162233.1-201ENST00000620014 944 ntBASIC2.84□□□□□ -1.95
TPM1P09493 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.84□□□□□ -1.95
TPM1P09493 CYP3A51P-201ENST00000633513 256 ntBASIC2.84□□□□□ -1.95
TPM1P09493 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.84□□□□□ -1.95
TPM1P09493 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
TPM1P09493 AC135776.4-201ENST00000624300 1904 ntBASIC2.83□□□□□ -1.96
TPM1P09493 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TPM1P09493 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
TPM1P09493 U8.8-201ENST00000365399 135 ntBASIC2.83□□□□□ -1.96
TPM1P09493 SET-203ENST00000372688 801 ntTSL 2 BASIC2.83□□□□□ -1.96
TPM1P09493 SNORD51-201ENST00000384320 80 ntBASIC2.83□□□□□ -1.96
TPM1P09493 RNU6-1197P-201ENST00000391183 107 ntBASIC2.83□□□□□ -1.96
TPM1P09493 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.83□□□□□ -1.96
TPM1P09493 USP9YP20-201ENST00000419224 558 ntBASIC2.83□□□□□ -1.96
TPM1P09493 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.83□□□□□ -1.96
TPM1P09493 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.83□□□□□ -1.96
TPM1P09493 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TPM1P09493 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.83□□□□□ -1.96
TPM1P09493 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.83□□□□□ -1.96
TPM1P09493 RPS29P26-201ENST00000477483 171 ntBASIC2.83□□□□□ -1.96
TPM1P09493 RPL23AP70-201ENST00000483361 460 ntBASIC2.83□□□□□ -1.96
TPM1P09493 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.83□□□□□ -1.96
TPM1P09493 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.83□□□□□ -1.96
TPM1P09493 AC010625.1-201ENST00000511296 403 ntBASIC2.83□□□□□ -1.96
TPM1P09493 RNA5SP341-201ENST00000516261 117 ntBASIC2.83□□□□□ -1.96
TPM1P09493 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
TPM1P09493 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.83□□□□□ -1.96
TPM1P09493 AC023824.3-201ENST00000569003 562 ntBASIC2.83□□□□□ -1.96
TPM1P09493 AC103810.1-201ENST00000579873 453 ntBASIC2.83□□□□□ -1.96
TPM1P09493 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.83□□□□□ -1.96
TPM1P09493 RPL23AP92-201ENST00000603609 255 ntBASIC2.83□□□□□ -1.96
TPM1P09493 AC119501.1-201ENST00000603646 475 ntBASIC2.83□□□□□ -1.96
TPM1P09493 AL136363.1-201ENST00000605349 337 ntBASIC2.83□□□□□ -1.96
TPM1P09493 ATP5A1P2-202ENST00000616464 443 ntBASIC2.83□□□□□ -1.96
TPM1P09493 AC008568.2-201ENST00000623862 2313 ntBASIC2.83□□□□□ -1.96
TPM1P09493 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TPM1P09493 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.82□□□□□ -1.96
TPM1P09493 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.82□□□□□ -1.96
TPM1P09493 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
TPM1P09493 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
TPM1P09493 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
TPM1P09493 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.82□□□□□ -1.96
TPM1P09493 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TPM1P09493 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
TPM1P09493 SNORA11B-201ENST00000408175 129 ntBASIC2.82□□□□□ -1.96
TPM1P09493 RNU6-193P-201ENST00000410977 107 ntBASIC2.82□□□□□ -1.96
TPM1P09493 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.82□□□□□ -1.96
TPM1P09493 RPL31P54-201ENST00000429803 370 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms