Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.16□□□□□ -1.9
MT-ND1P03886 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.16□□□□□ -1.9
MT-ND1P03886 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.16□□□□□ -1.9
MT-ND1P03886 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.16□□□□□ -1.9
MT-ND1P03886 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
MT-ND1P03886 CYCSP2-201ENST00000558168 301 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 AL845331.3-202ENST00000562856 261 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.16□□□□□ -1.9
MT-ND1P03886 COX6CP3-201ENST00000580869 223 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.16□□□□□ -1.9
MT-ND1P03886 AC006116.10-201ENST00000591836 581 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 AC010591.1-201ENST00000603941 649 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 AC018714.1-201ENST00000605028 208 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.16□□□□□ -1.9
MT-ND1P03886 AC243773.3-201ENST00000613270 256 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
MT-ND1P03886 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
MT-ND1P03886 AP002907.1-201ENST00000606361 1430 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
MT-ND1P03886 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MT-ND1P03886 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
MT-ND1P03886 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
MT-ND1P03886 AL645937.1-201ENST00000641739 1652 ntBASIC3.15□□□□□ -1.9
MT-ND1P03886 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
MT-ND1P03886 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MT-ND1P03886 RNA5SP383-201ENST00000362934 120 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 RN7SKP280-201ENST00000364196 304 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.15□□□□□ -1.91
MT-ND1P03886 SNORD116-8-201ENST00000384365 95 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 RNY3P9-201ENST00000384727 106 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.15□□□□□ -1.91
MT-ND1P03886 DHFRP6-201ENST00000401776 268 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 RNA5SP44-201ENST00000410446 133 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 USP9YP33-201ENST00000412220 421 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.15□□□□□ -1.91
MT-ND1P03886 AL022400.1-201ENST00000423946 935 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.15□□□□□ -1.91
MT-ND1P03886 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.15□□□□□ -1.91
MT-ND1P03886 USP9YP35-201ENST00000435696 412 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 RPL23AP74-201ENST00000437246 471 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
MT-ND1P03886 NOTCH2P1-201ENST00000443481 624 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 MTATP6P26-201ENST00000445926 662 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MT-ND1P03886 EEF1E1P1-201ENST00000446998 430 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 OR6K5P-201ENST00000447050 945 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.15□□□□□ -1.91
MT-ND1P03886 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.15□□□□□ -1.91
MT-ND1P03886 ST13P14-201ENST00000474095 734 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 LINC00888-204ENST00000487386 421 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MT-ND1P03886 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.15□□□□□ -1.91
MT-ND1P03886 AC093534.1-201ENST00000504977 132 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.15□□□□□ -1.91
MT-ND1P03886 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.15□□□□□ -1.91
MT-ND1P03886 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.15□□□□□ -1.91
MT-ND1P03886 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.15□□□□□ -1.91
MT-ND1P03886 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.15□□□□□ -1.91
MT-ND1P03886 AC087373.1-201ENST00000524920 491 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.15□□□□□ -1.91
MT-ND1P03886 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.15□□□□□ -1.91
MT-ND1P03886 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.15□□□□□ -1.91
MT-ND1P03886 AC008088.1-201ENST00000580993 280 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 MIR4637-201ENST00000582405 84 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 VN1R85P-201ENST00000601587 426 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 AC072039.2-201ENST00000608883 439 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 AC106028.5-201ENST00000610332 395 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.15□□□□□ -1.91
MT-ND1P03886 AL353748.2-201ENST00000622148 471 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 AC007671.2-201ENST00000637344 619 ntBASIC3.15□□□□□ -1.91
MT-ND1P03886 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.91
MT-ND1P03886 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
MT-ND1P03886 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.14□□□□□ -1.91
MT-ND1P03886 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
MT-ND1P03886 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
MT-ND1P03886 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
MT-ND1P03886 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
MT-ND1P03886 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.14□□□□□ -1.91
MT-ND1P03886 AL137014.1-201ENST00000420490 1226 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.14□□□□□ -1.91
MT-ND1P03886 AC233728.2-201ENST00000425348 757 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 MTCO1P39-201ENST00000426148 480 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.14□□□□□ -1.91
MT-ND1P03886 AL591503.2-201ENST00000442314 1005 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.14□□□□□ -1.91
MT-ND1P03886 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.14□□□□□ -1.91
MT-ND1P03886 Z95327.1-201ENST00000446082 482 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 OR6C5P-201ENST00000452388 923 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 USP9YP34-201ENST00000453983 808 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 HMGN2P13-201ENST00000476476 274 ntBASIC3.14□□□□□ -1.91
MT-ND1P03886 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.14□□□□□ -1.91
MT-ND1P03886 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MT-ND1P03886 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.14□□□□□ -1.91
MT-ND1P03886 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.14□□□□□ -1.91
MT-ND1P03886 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.14□□□□□ -1.91
MT-ND1P03886 RN7SKP18-201ENST00000516005 275 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms