Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.06□□□□□ -2.08
TNFP01375 RPL21P99-201ENST00000480369 423 ntBASIC2.06□□□□□ -2.08
TNFP01375 AC109486.1-201ENST00000486833 374 ntBASIC2.06□□□□□ -2.08
TNFP01375 OR52A4P-203ENST00000498233 1014 ntBASIC2.06□□□□□ -2.08
TNFP01375 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.06□□□□□ -2.08
TNFP01375 NRBF2P1-201ENST00000587407 859 ntBASIC2.06□□□□□ -2.08
TNFP01375 AC008687.2-201ENST00000597865 520 ntBASIC2.06□□□□□ -2.08
TNFP01375 RPL23AP78-201ENST00000599928 470 ntBASIC2.06□□□□□ -2.08
TNFP01375 VIS1.1-201ENST00000610517 203 ntBASIC2.06□□□□□ -2.08
TNFP01375 AC011890.2-201ENST00000613393 294 ntBASIC2.06□□□□□ -2.08
TNFP01375 AL450472.3-201ENST00000615578 367 ntBASIC2.06□□□□□ -2.08
TNFP01375 AL356266.1-201ENST00000623311 483 ntBASIC2.06□□□□□ -2.08
TNFP01375 RPL23AP61-201ENST00000623642 466 ntBASIC2.06□□□□□ -2.08
TNFP01375 CU459211.1-201ENST00000635667 749 ntBASIC2.06□□□□□ -2.08
TNFP01375 FAM157B-203ENST00000639350 358 ntBASIC2.06□□□□□ -2.08
TNFP01375 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.06□□□□□ -2.08
TNFP01375 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TNFP01375 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
TNFP01375 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
TNFP01375 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.05□□□□□ -2.08
TNFP01375 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.05□□□□□ -2.08
TNFP01375 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
TNFP01375 AL512646.1-201ENST00000269395 1077 ntBASIC2.05□□□□□ -2.08
TNFP01375 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TNFP01375 SNORA80E-201ENST00000384744 137 ntBASIC2.05□□□□□ -2.08
TNFP01375 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.05□□□□□ -2.08
TNFP01375 ANAPC10P1-201ENST00000395991 556 ntBASIC2.05□□□□□ -2.08
TNFP01375 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.05□□□□□ -2.08
TNFP01375 MIR1289-2-201ENST00000408360 111 ntBASIC2.05□□□□□ -2.08
TNFP01375 RPS7P2-201ENST00000435134 607 ntBASIC2.05□□□□□ -2.08
TNFP01375 RABEPKP1-201ENST00000440529 1026 ntBASIC2.05□□□□□ -2.08
TNFP01375 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.05□□□□□ -2.08
TNFP01375 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.05□□□□□ -2.08
TNFP01375 OR51B8P-201ENST00000449892 769 ntBASIC2.05□□□□□ -2.08
TNFP01375 RPL38P4-201ENST00000502376 214 ntBASIC2.05□□□□□ -2.08
TNFP01375 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.05□□□□□ -2.08
TNFP01375 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.05□□□□□ -2.08
TNFP01375 TTC39CP1-201ENST00000512513 755 ntBASIC2.05□□□□□ -2.08
TNFP01375 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.05□□□□□ -2.08
TNFP01375 RN7SKP40-201ENST00000517211 242 ntBASIC2.05□□□□□ -2.08
TNFP01375 CIR1P1-201ENST00000524055 1133 ntBASIC2.05□□□□□ -2.08
TNFP01375 OR4R1P-201ENST00000529879 463 ntBASIC2.05□□□□□ -2.08
TNFP01375 AC078814.3-201ENST00000553036 491 ntBASIC2.05□□□□□ -2.08
TNFP01375 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.05□□□□□ -2.08
TNFP01375 MTCYBP28-201ENST00000566728 1132 ntBASIC2.05□□□□□ -2.08
TNFP01375 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.05□□□□□ -2.08
TNFP01375 NUTF2P8-201ENST00000604593 363 ntBASIC2.05□□□□□ -2.08
TNFP01375 CR589904.2-201ENST00000612533 440 ntBASIC2.05□□□□□ -2.08
TNFP01375 MIR6864-201ENST00000617935 70 ntBASIC2.05□□□□□ -2.08
TNFP01375 U73479.1-201ENST00000618062 168 ntBASIC2.05□□□□□ -2.08
TNFP01375 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
TNFP01375 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.05□□□□□ -2.08
TNFP01375 ZNF734P-201ENST00000419494 1534 ntBASIC2.05□□□□□ -2.08
TNFP01375 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TNFP01375 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.05□□□□□ -2.08
TNFP01375 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
TNFP01375 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.05□□□□□ -2.08
TNFP01375 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
TNFP01375 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
TNFP01375 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TNFP01375 RNU6-317P-201ENST00000384031 107 ntBASIC2.04□□□□□ -2.08
TNFP01375 RNA5SP38-201ENST00000410750 119 ntBASIC2.04□□□□□ -2.08
TNFP01375 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.04□□□□□ -2.08
TNFP01375 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.04□□□□□ -2.08
TNFP01375 PABPC1P9-201ENST00000426076 1612 ntBASIC2.04□□□□□ -2.08
TNFP01375 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.04□□□□□ -2.08
TNFP01375 MTCYBP29-201ENST00000436327 1006 ntBASIC2.04□□□□□ -2.08
TNFP01375 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.04□□□□□ -2.08
TNFP01375 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.04□□□□□ -2.08
TNFP01375 RPS15AP7-201ENST00000439294 405 ntBASIC2.04□□□□□ -2.08
TNFP01375 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.04□□□□□ -2.08
TNFP01375 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.04□□□□□ -2.08
TNFP01375 FTH1P25-201ENST00000447665 469 ntBASIC2.04□□□□□ -2.08
TNFP01375 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.04□□□□□ -2.08
TNFP01375 TRBV1-201ENST00000476502 284 ntBASIC2.04□□□□□ -2.08
TNFP01375 AC004263.1-201ENST00000479327 332 ntBASIC2.04□□□□□ -2.08
TNFP01375 AC023424.2-201ENST00000493479 777 ntBASIC2.04□□□□□ -2.08
TNFP01375 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.04□□□□□ -2.08
TNFP01375 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.04□□□□□ -2.08
TNFP01375 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.04□□□□□ -2.08
TNFP01375 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.04□□□□□ -2.08
TNFP01375 AC012213.4-201ENST00000606457 354 ntBASIC2.04□□□□□ -2.08
TNFP01375 AC103710.1-201ENST00000610003 901 ntBASIC2.04□□□□□ -2.08
TNFP01375 AL137847.3-201ENST00000611521 109 ntBASIC2.04□□□□□ -2.08
TNFP01375 AC011472.4-201ENST00000615848 491 ntBASIC2.04□□□□□ -2.08
TNFP01375 RMST_5.1-201ENST00000618704 126 ntBASIC2.04□□□□□ -2.08
TNFP01375 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.04□□□□□ -2.08
TNFP01375 PISRT1-201ENST00000626175 531 ntBASIC2.04□□□□□ -2.08
TNFP01375 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.04□□□□□ -2.08
TNFP01375 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
TNFP01375 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.03□□□□□ -2.08
TNFP01375 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
TNFP01375 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
TNFP01375 AC022031.1-201ENST00000585985 2593 ntBASIC2.03□□□□□ -2.08
TNFP01375 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TNFP01375 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TNFP01375 RN7SKP226-201ENST00000364912 300 ntBASIC2.03□□□□□ -2.08
TNFP01375 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC2.03□□□□□ -2.08
TNFP01375 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.03□□□□□ -2.08
TNFP01375 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms