Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.24□□□□□ -2.05
CPSF4O95639 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.24□□□□□ -2.05
CPSF4O95639 BX649567.1-201ENST00000642071 1134 ntBASIC2.24□□□□□ -2.05
CPSF4O95639 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
CPSF4O95639 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CPSF4O95639 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CPSF4O95639 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CPSF4O95639 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.23□□□□□ -2.05
CPSF4O95639 ZNF734P-201ENST00000419494 1534 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.23□□□□□ -2.05
CPSF4O95639 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CPSF4O95639 AL136164.4-201ENST00000625013 2135 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CPSF4O95639 AC062016.1-201ENST00000355719 319 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 RNA5SP68-201ENST00000363885 119 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 SNORA80A-201ENST00000363922 136 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 RNU6-468P-201ENST00000384003 109 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 RNU6-629P-201ENST00000384061 103 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 Y_RNA.493-201ENST00000384422 102 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 MT-TC-201ENST00000387405 66 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 RNU1-101P-201ENST00000391171 127 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 RNA5SP184-201ENST00000411071 108 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.23□□□□□ -2.05
CPSF4O95639 RAP1BP1-201ENST00000412709 553 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.23□□□□□ -2.05
CPSF4O95639 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CPSF4O95639 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.23□□□□□ -2.05
CPSF4O95639 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.23□□□□□ -2.05
CPSF4O95639 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.23□□□□□ -2.05
CPSF4O95639 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.23□□□□□ -2.05
CPSF4O95639 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.23□□□□□ -2.05
CPSF4O95639 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.23□□□□□ -2.05
CPSF4O95639 RPL23AP20-201ENST00000447965 421 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 snoU13.22-201ENST00000459428 104 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 snoU13.3-201ENST00000459441 104 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.23□□□□□ -2.05
CPSF4O95639 AC096576.1-201ENST00000489014 359 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.23□□□□□ -2.05
CPSF4O95639 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CPSF4O95639 AC118282.2-201ENST00000508739 374 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 RNA5SP356-201ENST00000515972 94 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 SNORA31.15-201ENST00000516771 132 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.23□□□□□ -2.05
CPSF4O95639 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.23□□□□□ -2.05
CPSF4O95639 AC021269.2-201ENST00000532318 330 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.23□□□□□ -2.05
CPSF4O95639 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.23□□□□□ -2.05
CPSF4O95639 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.23□□□□□ -2.05
CPSF4O95639 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.23□□□□□ -2.05
CPSF4O95639 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.23□□□□□ -2.05
CPSF4O95639 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.23□□□□□ -2.05
CPSF4O95639 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.23□□□□□ -2.05
CPSF4O95639 AC007621.1-201ENST00000604544 437 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 RPL21P136-201ENST00000605378 396 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 AC067747.1-201ENST00000608026 250 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CPSF4O95639 AC084824.5-201ENST00000612009 413 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.23□□□□□ -2.05
CPSF4O95639 AC068880.4-201ENST00000623082 495 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 AC093875.1-201ENST00000623688 504 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.23□□□□□ -2.05
CPSF4O95639 AC097714.1-201ENST00000511272 1647 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.23□□□□□ -2.05
CPSF4O95639 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
CPSF4O95639 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.23□□□□□ -2.05
CPSF4O95639 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.22□□□□□ -2.05
CPSF4O95639 AP001350.1-201ENST00000601906 1524 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CPSF4O95639 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.22□□□□□ -2.05
CPSF4O95639 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CPSF4O95639 OR5H15-201ENST00000383696 930 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CPSF4O95639 RNA5SP56-201ENST00000410277 118 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 RNU4-78P-201ENST00000410940 126 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 RNU6-575P-201ENST00000411326 105 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 SFR1P2-201ENST00000421841 730 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.22□□□□□ -2.05
CPSF4O95639 ATP5F1P1-201ENST00000433775 569 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 SEPT14P24-201ENST00000447236 180 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.22□□□□□ -2.05
CPSF4O95639 AC104073.1-201ENST00000451988 151 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.22□□□□□ -2.05
CPSF4O95639 RN7SL432P-201ENST00000484057 298 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 RPL36AP51-201ENST00000487216 318 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CPSF4O95639 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CPSF4O95639 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CPSF4O95639 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.22□□□□□ -2.05
CPSF4O95639 XKRY-201ENST00000510392 1100 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.22□□□□□ -2.05
CPSF4O95639 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CPSF4O95639 AP000790.1-201ENST00000528891 737 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 AC087241.2-201ENST00000535801 324 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 EIF4BP1-201ENST00000554881 351 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.22□□□□□ -2.05
CPSF4O95639 SNORD39.3-201ENST00000584451 71 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.22□□□□□ -2.05
CPSF4O95639 RPL23AP92-201ENST00000603609 255 ntBASIC2.22□□□□□ -2.05
CPSF4O95639 AC002487.1-201ENST00000604565 994 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms