Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 RSL24D1P2-201ENST00000445584 366 ntBASIC3.09□□□□□ -1.92
NPHP4O75161 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.09□□□□□ -1.92
NPHP4O75161 MTND3P4-201ENST00000453537 303 ntBASIC3.09□□□□□ -1.92
NPHP4O75161 TRBV26-201ENST00000456572 344 ntBASIC3.09□□□□□ -1.92
NPHP4O75161 AC092451.1-201ENST00000480211 153 ntBASIC3.09□□□□□ -1.92
NPHP4O75161 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.09□□□□□ -1.92
NPHP4O75161 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.09□□□□□ -1.92
NPHP4O75161 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.09□□□□□ -1.92
NPHP4O75161 BX664608.1-201ENST00000610519 487 ntBASIC3.09□□□□□ -1.92
NPHP4O75161 AC121761.2-201ENST00000617300 689 ntBASIC3.09□□□□□ -1.92
NPHP4O75161 RNU6-156P-201ENST00000621869 107 ntBASIC3.09□□□□□ -1.92
NPHP4O75161 AC006065.5-201ENST00000623427 349 ntBASIC3.09□□□□□ -1.92
NPHP4O75161 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.08□□□□□ -1.92
NPHP4O75161 AP005901.5-201ENST00000545779 1796 ntBASIC3.08□□□□□ -1.92
NPHP4O75161 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.08□□□□□ -1.92
NPHP4O75161 SNORA26.7-201ENST00000391288 122 ntBASIC3.08□□□□□ -1.92
NPHP4O75161 FGF7P8-201ENST00000402994 292 ntBASIC3.08□□□□□ -1.92
NPHP4O75161 HMGB1P13-201ENST00000406019 642 ntBASIC3.08□□□□□ -1.92
NPHP4O75161 OR4K11P-201ENST00000431829 904 ntBASIC3.08□□□□□ -1.92
NPHP4O75161 AC023347.2-201ENST00000433994 462 ntBASIC3.08□□□□□ -1.92
NPHP4O75161 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.08□□□□□ -1.92
NPHP4O75161 AL138799.3-201ENST00000438968 350 ntBASIC3.08□□□□□ -1.92
NPHP4O75161 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.08□□□□□ -1.92
NPHP4O75161 AC245517.4-201ENST00000448601 281 ntBASIC3.08□□□□□ -1.92
NPHP4O75161 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.08□□□□□ -1.92
NPHP4O75161 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.08□□□□□ -1.92
NPHP4O75161 RN7SKP234-201ENST00000517173 224 ntBASIC3.08□□□□□ -1.92
NPHP4O75161 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.08□□□□□ -1.92
NPHP4O75161 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.08□□□□□ -1.92
NPHP4O75161 AC078814.3-201ENST00000553036 491 ntBASIC3.08□□□□□ -1.92
NPHP4O75161 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.08□□□□□ -1.92
NPHP4O75161 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.08□□□□□ -1.92
NPHP4O75161 LLPHP1-201ENST00000603571 367 ntBASIC3.08□□□□□ -1.92
NPHP4O75161 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
NPHP4O75161 AC009831.4-201ENST00000620744 325 ntBASIC3.08□□□□□ -1.92
NPHP4O75161 MIR6132-201ENST00000622083 109 ntBASIC3.08□□□□□ -1.92
NPHP4O75161 AL355578.1-201ENST00000607405 1328 ntBASIC3.07□□□□□ -1.92
NPHP4O75161 AL161431.1-201ENST00000618966 4205 ntBASIC3.07□□□□□ -1.92
NPHP4O75161 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NPHP4O75161 RN7SKP226-201ENST00000364912 300 ntBASIC3.07□□□□□ -1.92
NPHP4O75161 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.07□□□□□ -1.92
NPHP4O75161 XKRYP4-201ENST00000414395 483 ntBASIC3.07□□□□□ -1.92
NPHP4O75161 TRIAP1P1-201ENST00000427062 225 ntBASIC3.07□□□□□ -1.92
NPHP4O75161 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.07□□□□□ -1.92
NPHP4O75161 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.07□□□□□ -1.92
NPHP4O75161 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.07□□□□□ -1.92
NPHP4O75161 XKRYP5-201ENST00000449659 483 ntBASIC3.07□□□□□ -1.92
NPHP4O75161 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.07□□□□□ -1.92
NPHP4O75161 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.07□□□□□ -1.92
NPHP4O75161 OR9N1P-202ENST00000494289 481 ntBASIC3.07□□□□□ -1.92
NPHP4O75161 RNU2-58P-201ENST00000516403 183 ntBASIC3.07□□□□□ -1.92
NPHP4O75161 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.07□□□□□ -1.92
NPHP4O75161 AC139103.1-201ENST00000534696 1030 ntBASIC3.07□□□□□ -1.92
NPHP4O75161 AC126177.3-201ENST00000551839 688 ntBASIC3.07□□□□□ -1.92
NPHP4O75161 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.07□□□□□ -1.92
NPHP4O75161 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.07□□□□□ -1.92
NPHP4O75161 AC002064.3-201ENST00000623448 346 ntBASIC3.07□□□□□ -1.92
NPHP4O75161 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NPHP4O75161 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
NPHP4O75161 AC091152.2-201ENST00000591628 2569 ntBASIC3.07□□□□□ -1.92
NPHP4O75161 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NPHP4O75161 AF127577.6-201ENST00000623352 2191 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 MTND4P13-201ENST00000402078 1023 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 RNU2-21P-201ENST00000410368 188 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AC233279.1-201ENST00000455300 423 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.06□□□□□ -1.92
NPHP4O75161 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.06□□□□□ -1.92
NPHP4O75161 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.06□□□□□ -1.92
NPHP4O75161 AC008494.2-201ENST00000514544 370 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.06□□□□□ -1.92
NPHP4O75161 HMGB1P41-201ENST00000520234 440 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NPHP4O75161 MTND2P26-201ENST00000528255 1029 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.06□□□□□ -1.92
NPHP4O75161 OR4T1P-201ENST00000554933 911 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AL670379.6-201ENST00000603753 252 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AL670379.11-201ENST00000604059 253 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AL670379.10-201ENST00000604330 253 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AC008162.1-201ENST00000604718 254 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AL670379.1-201ENST00000604752 252 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AL670379.2-201ENST00000604983 252 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AL670379.5-201ENST00000605253 252 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AL670379.4-201ENST00000605279 254 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AL670379.12-201ENST00000605291 253 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AL670379.8-201ENST00000605353 252 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AL670379.9-201ENST00000605428 253 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AL670379.7-201ENST00000605823 252 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AC105429.2-201ENST00000610567 517 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AC104820.1-201ENST00000624183 307 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 AL049737.1-201ENST00000413920 1403 ntBASIC3.06□□□□□ -1.92
NPHP4O75161 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.06□□□□□ -1.92
NPHP4O75161 MIR378A-201ENST00000362177 66 ntBASIC3.05□□□□□ -1.92
NPHP4O75161 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.05□□□□□ -1.92
NPHP4O75161 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.05□□□□□ -1.92
NPHP4O75161 AC097499.1-201ENST00000444277 208 ntBASIC3.05□□□□□ -1.92
NPHP4O75161 SNX5P1-201ENST00000505757 1041 ntBASIC3.05□□□□□ -1.92
NPHP4O75161 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.05□□□□□ -1.92
NPHP4O75161 MTCO1P30-201ENST00000515244 580 ntBASIC3.05□□□□□ -1.92
NPHP4O75161 RN7SKP277-201ENST00000516895 283 ntBASIC3.05□□□□□ -1.92
NPHP4O75161 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms