Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AL031119.1-201ENST00000404707 1879 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTCD1O75127 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTCD1O75127 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTCD1O75127 SNORA71.2-201ENST00000364941 134 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.03□□□□□ -1.44
PTCD1O75127 AC114482.1-201ENST00000418010 247 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 AL354766.1-201ENST00000423396 542 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 SNRPEP4-201ENST00000435815 279 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 AL356981.1-201ENST00000454879 684 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC6.03□□□□□ -1.44
PTCD1O75127 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC6.03□□□□□ -1.44
PTCD1O75127 RPL7AP28-201ENST00000464513 571 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 AC083904.1-201ENST00000487828 231 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.03□□□□□ -1.44
PTCD1O75127 RNU6-273P-201ENST00000516937 96 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCD1O75127 AL117187.1-201ENST00000555482 181 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 AC074050.1-201ENST00000563247 211 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 MIR4703-201ENST00000577728 79 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCD1O75127 AC007566.2-201ENST00000603642 413 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 AL022099.1-201ENST00000604551 712 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 AL451044.1-201ENST00000604867 238 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 AC080078.3-201ENST00000605407 463 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 RNA5SP439-201ENST00000617595 124 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 AP005019.3-201ENST00000620418 560 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 NXPH1-205ENST00000602349 1953 ntBASIC6.03□□□□□ -1.44
PTCD1O75127 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTCD1O75127 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
PTCD1O75127 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
PTCD1O75127 AP005432.1-201ENST00000580891 3485 ntBASIC6.02□□□□□ -1.44
PTCD1O75127 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
PTCD1O75127 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTCD1O75127 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.02□□□□□ -1.45
PTCD1O75127 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTCD1O75127 ZNF402P-201ENST00000404435 3100 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
PTCD1O75127 RNU6-511P-201ENST00000363496 107 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 RNU6-522P-201ENST00000364497 107 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 RNU6-1013P-201ENST00000384180 107 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 RNU6-1222P-201ENST00000384615 107 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 AL590762.2-201ENST00000395798 571 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 MIR1302-3-201ENST00000408128 138 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 PMCHL1-202ENST00000423102 261 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 CEACAMP1-201ENST00000434624 1035 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 HMGB3P11-201ENST00000440127 604 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 PRPS1P1-201ENST00000445305 876 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.02□□□□□ -1.45
PTCD1O75127 AL118520.1-201ENST00000450770 291 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.02□□□□□ -1.45
PTCD1O75127 CECR9-201ENST00000453421 199 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 SNRPFP3-201ENST00000457792 225 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 AC245028.2-201ENST00000458673 253 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 AC010655.3-201ENST00000478818 450 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 MTCO1P29-201ENST00000496868 288 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 KLHL2P1-201ENST00000508691 521 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 SNORA25.17-201ENST00000517184 124 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC6.02□□□□□ -1.45
PTCD1O75127 MYL12AP1-201ENST00000518490 515 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.02□□□□□ -1.45
PTCD1O75127 MIR3160-1-201ENST00000577972 85 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 POLR3GP2-201ENST00000588366 668 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PTCD1O75127 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
PTCD1O75127 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.02□□□□□ -1.45
PTCD1O75127 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PTCD1O75127 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
PTCD1O75127 AL022311.1-201ENST00000623726 19416 ntBASIC6.02□□□□□ -1.45
PTCD1O75127 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTCD1O75127 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
PTCD1O75127 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.02□□□□□ -1.45
PTCD1O75127 ADAM5-202ENST00000399789 1942 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCD1O75127 MTCO1P12-201ENST00000414273 1543 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PTCD1O75127 RNU6-179P-201ENST00000363350 107 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 Y_RNA.530-201ENST00000384587 101 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 AL136372.1-201ENST00000403060 228 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 RPL7L1P10-201ENST00000427790 463 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCD1O75127 CYCSP34-201ENST00000458172 304 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 Y_RNA.635-201ENST00000459041 101 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 AC053481.1-201ENST00000467217 306 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 VN1R17P-201ENST00000472048 1090 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 RPL23AP11-201ENST00000475260 469 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 HMGB1P30-201ENST00000492455 606 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 ALDH7A1P3-201ENST00000492517 345 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 AC106872.2-201ENST00000494303 480 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCD1O75127 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.01□□□□□ -1.45
PTCD1O75127 RNU6-27P-201ENST00000516146 107 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 FAM60DP-201ENST00000524174 632 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 AP003122.3-201ENST00000526316 255 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCD1O75127 AC005868.1-201ENST00000536421 331 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.01□□□□□ -1.45
PTCD1O75127 AL133153.1-201ENST00000557756 303 ntBASIC6.01□□□□□ -1.45
PTCD1O75127 APOOP1-201ENST00000604695 592 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms