Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AC069277.2-201ENST00000454211 432 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AC092798.1-201ENST00000458542 409 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 RPL5P13-201ENST00000462840 709 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 MIR548Y-201ENST00000582739 110 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AC012360.2-201ENST00000609349 391 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 CYP3A51P-201ENST00000633513 256 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 GSTA12P-201ENST00000402398 508 ntBASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 NCSTNP1-201ENST00000406229 144 ntBASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AC008173.1-201ENST00000418901 264 ntBASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AC003989.2-201ENST00000440224 169 ntBASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 RPL36AP33-201ENST00000450395 310 ntBASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 MTND5P21-201ENST00000531961 522 ntBASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AC091953.2-201ENST00000623979 160 ntBASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AC104332.2-201ENST00000429959 156 ntBASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AC022022.1-201ENST00000430304 178 ntBASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AC022431.1-201ENST00000450941 438 ntBASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AC068446.3-201ENST00000555285 382 ntBASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 OR4H12P-201ENST00000556269 907 ntBASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 NF1P5-201ENST00000588287 448 ntBASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AC068790.3-201ENST00000602988 553 ntBASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AC099778.2-201ENST00000610904 211 ntBASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 MTND4P35-201ENST00000604257 1375 ntBASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.79□□□□□ -2.12
COL6A6A6NMZ7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 U8.8-201ENST00000365399 135 ntBASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 RNU6-152P-201ENST00000384037 107 ntBASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 MIR7-1-201ENST00000384871 110 ntBASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 RN7SKP123-201ENST00000410732 291 ntBASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 AL355994.1-201ENST00000424379 260 ntBASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 AL590762.3-201ENST00000436372 640 ntBASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 AC025016.1-201ENST00000616746 682 ntBASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 AC119674.1-220ENST00000641502 1048 ntBASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 AC110774.1-201ENST00000623567 2018 ntBASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 AP001148.1-201ENST00000624124 2359 ntBASIC1.78□□□□□ -2.12
COL6A6A6NMZ7 RNU6-891P-201ENST00000384280 111 ntBASIC1.78□□□□□ -2.13
COL6A6A6NMZ7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.78□□□□□ -2.13
COL6A6A6NMZ7 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.78□□□□□ -2.13
COL6A6A6NMZ7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.78□□□□□ -2.13
COL6A6A6NMZ7 ATP5J2P3-201ENST00000451550 258 ntBASIC1.78□□□□□ -2.13
COL6A6A6NMZ7 RPL21P134-201ENST00000453468 483 ntBASIC1.78□□□□□ -2.13
COL6A6A6NMZ7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.78□□□□□ -2.13
COL6A6A6NMZ7 AC108157.1-201ENST00000510511 539 ntBASIC1.78□□□□□ -2.13
COL6A6A6NMZ7 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.78□□□□□ -2.13
COL6A6A6NMZ7 RNA5SP220-201ENST00000516298 104 ntBASIC1.78□□□□□ -2.13
COL6A6A6NMZ7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC1.78□□□□□ -2.13
COL6A6A6NMZ7 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.78□□□□□ -2.13
COL6A6A6NMZ7 AC074029.2-201ENST00000551045 634 ntBASIC1.78□□□□□ -2.13
COL6A6A6NMZ7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.78□□□□□ -2.13
COL6A6A6NMZ7 AL135786.2-201ENST00000608422 615 ntBASIC1.78□□□□□ -2.13
COL6A6A6NMZ7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
COL6A6A6NMZ7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AL118496.1-201ENST00000440201 1812 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 OR5H15-201ENST00000383696 930 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 RNU6-356P-201ENST00000384140 107 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 SNORA51.11-201ENST00000384442 131 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 RNA5SP181-201ENST00000410246 98 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 USP9YP8-201ENST00000441913 500 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 BUD31P2-201ENST00000449374 300 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 RPL31P20-201ENST00000449593 360 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 RNU6-775P-201ENST00000459318 96 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AC092991.1-201ENST00000477176 376 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 ATG10-AS1-201ENST00000504846 648 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 HMGB1P47-201ENST00000511281 589 ntBASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC1.77□□□□□ -2.13
COL6A6A6NMZ7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms