Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AC011260.1-201ENST00000578420 472 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 BNIP3P27-201ENST00000599991 412 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AL031985.2-201ENST00000600955 480 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 HSPE1P7-201ENST00000604681 321 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AL158050.2-201ENST00000605336 568 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AL157817.1-201ENST00000614264 790 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 MIR6130-201ENST00000619419 109 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AL355480.1-201ENST00000629041 99 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 AL390862.1-201ENST00000635467 1469 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 DPY19L2P2-203ENST00000435536 1858 ntBASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.68□□□□□ -1.98
KCNIP3Q9Y2W7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 RNU6-343P-201ENST00000364709 104 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 MIR122-201ENST00000385044 85 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AC007066.1-201ENST00000392902 381 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 RNA5SP274-201ENST00000410484 108 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 RAP1BP1-201ENST00000412709 553 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 BX842559.1-201ENST00000419615 532 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 THAP5P1-201ENST00000439089 262 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 RPL23AP20-201ENST00000447965 421 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 RPL31P50-201ENST00000471002 296 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AC111000.2-201ENST00000507775 550 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AL359273.1-201ENST00000510918 627 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 MTCO1P35-201ENST00000515270 228 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 RNU6-528P-201ENST00000516926 100 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AC103843.2-201ENST00000530523 682 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 HSPE1P20-201ENST00000538133 289 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AC091057.2-201ENST00000602594 792 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 DUXAP10-204ENST00000612052 616 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AC091046.2-201ENST00000620775 665 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AC002550.2-201ENST00000621246 394 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AL022578.1-201ENST00000439330 1433 ntBASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KCNIP3Q9Y2W7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 Y_RNA.234-201ENST00000364409 97 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 MIR323B-201ENST00000385269 82 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 RNA5SP252-201ENST00000391131 119 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 ERHP2-201ENST00000402323 299 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 AL136310.1-201ENST00000404926 654 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 MIR1290-201ENST00000408735 78 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 RNA5SP492-201ENST00000411330 114 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 AL356320.2-201ENST00000417263 507 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 RPS3AP37-201ENST00000419176 745 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 AL139421.1-201ENST00000423010 169 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 AC234781.2-201ENST00000426370 994 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 RPL7P2-201ENST00000427639 268 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 SAR1AP4-201ENST00000429225 591 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 CYCSP4-201ENST00000429682 331 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 CDC27P1-201ENST00000445384 715 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 AL592447.1-201ENST00000447592 540 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 AC073387.1-201ENST00000453261 709 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 snoU109.3-201ENST00000459477 145 ntBASIC2.66□□□□□ -1.98
KCNIP3Q9Y2W7 AC008571.1-201ENST00000467232 300 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms