Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC005840.1-201ENST00000498412 377 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.49□□□□□ -2.01
SCN11AQ9UI33 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.49□□□□□ -2.01
SCN11AQ9UI33 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.49□□□□□ -2.01
SCN11AQ9UI33 AC108479.2-201ENST00000617314 601 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.48□□□□□ -2.01
SCN11AQ9UI33 MIR499A-201ENST00000384903 122 ntBASIC2.48□□□□□ -2.01
SCN11AQ9UI33 MTND2P16-201ENST00000419987 799 ntBASIC2.48□□□□□ -2.01
SCN11AQ9UI33 AC104332.2-201ENST00000429959 156 ntBASIC2.48□□□□□ -2.01
SCN11AQ9UI33 MTCO1P43-201ENST00000431831 488 ntBASIC2.48□□□□□ -2.01
SCN11AQ9UI33 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SCN11AQ9UI33 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.48□□□□□ -2.01
SCN11AQ9UI33 AC018754.1-201ENST00000607486 925 ntBASIC2.48□□□□□ -2.01
SCN11AQ9UI33 AL135786.2-201ENST00000608422 615 ntBASIC2.48□□□□□ -2.01
SCN11AQ9UI33 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.48□□□□□ -2.01
SCN11AQ9UI33 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SCN11AQ9UI33 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SCN11AQ9UI33 METTL21EP-201ENST00000298105 713 ntBASIC2.47□□□□□ -2.01
SCN11AQ9UI33 VTRNA1-1-201ENST00000363120 99 ntBASIC2.47□□□□□ -2.01
SCN11AQ9UI33 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.47□□□□□ -2.01
SCN11AQ9UI33 FGF7P8-201ENST00000402994 292 ntBASIC2.47□□□□□ -2.01
SCN11AQ9UI33 AL513331.1-201ENST00000411908 397 ntBASIC2.47□□□□□ -2.01
SCN11AQ9UI33 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.47□□□□□ -2.01
SCN11AQ9UI33 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.47□□□□□ -2.01
SCN11AQ9UI33 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.47□□□□□ -2.01
SCN11AQ9UI33 AC103810.1-201ENST00000579873 453 ntBASIC2.47□□□□□ -2.01
SCN11AQ9UI33 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN11AQ9UI33 RPL23AP88-201ENST00000605759 454 ntBASIC2.47□□□□□ -2.01
SCN11AQ9UI33 AC110774.1-201ENST00000623567 2018 ntBASIC2.47□□□□□ -2.01
SCN11AQ9UI33 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SCN11AQ9UI33 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SCN11AQ9UI33 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SCN11AQ9UI33 U8.10-201ENST00000384260 133 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 OR4K11P-201ENST00000431829 904 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 RAB9AP5-201ENST00000437794 597 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 RAB9AP2-201ENST00000443911 597 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AC027673.1-201ENST00000456245 405 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AC108078.2-201ENST00000510750 236 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.46□□□□□ -2.02
SCN11AQ9UI33 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AC138649.5-201ENST00000637456 137 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AC011978.2-201ENST00000569835 2054 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AL353746.1-201ENST00000566293 6881 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 RNA5SP160-201ENST00000364866 120 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 RNA5SP338-201ENST00000410495 85 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.46□□□□□ -2.02
SCN11AQ9UI33 ARPC3P2-201ENST00000457786 533 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 NAMPTP2-201ENST00000505629 1115 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 RN7SKP96-201ENST00000516948 297 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.46□□□□□ -2.02
SCN11AQ9UI33 HMGN1P28-201ENST00000521340 364 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.46□□□□□ -2.02
SCN11AQ9UI33 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.46□□□□□ -2.02
SCN11AQ9UI33 PSMA6P4-201ENST00000603247 718 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AC009314.1-201ENST00000603871 304 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AC010200.2-201ENST00000605098 235 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AL391813.2-201ENST00000609113 322 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AC091953.2-201ENST00000623979 160 ntBASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.46□□□□□ -2.02
SCN11AQ9UI33 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.45□□□□□ -2.02
SCN11AQ9UI33 DCAF13P1-201ENST00000495256 1330 ntBASIC2.45□□□□□ -2.02
SCN11AQ9UI33 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SCN11AQ9UI33 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.45□□□□□ -2.02
SCN11AQ9UI33 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SCN11AQ9UI33 RPS15AP1-201ENST00000457423 391 ntBASIC2.45□□□□□ -2.02
SCN11AQ9UI33 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.45□□□□□ -2.02
SCN11AQ9UI33 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.45□□□□□ -2.02
SCN11AQ9UI33 AC010735.1-201ENST00000567305 1026 ntBASIC2.45□□□□□ -2.02
SCN11AQ9UI33 AL110115.1-201ENST00000614396 364 ntBASIC2.45□□□□□ -2.02
SCN11AQ9UI33 AC002064.3-201ENST00000623448 346 ntBASIC2.45□□□□□ -2.02
SCN11AQ9UI33 AC090897.3-201ENST00000636973 1157 ntBASIC2.45□□□□□ -2.02
SCN11AQ9UI33 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SCN11AQ9UI33 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.44□□□□□ -2.02
SCN11AQ9UI33 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.44□□□□□ -2.02
SCN11AQ9UI33 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
SCN11AQ9UI33 MIR4458-201ENST00000578872 75 ntBASIC2.44□□□□□ -2.02
SCN11AQ9UI33 VN1R84P-201ENST00000593697 235 ntBASIC2.44□□□□□ -2.02
SCN11AQ9UI33 RPL23AP78-201ENST00000599928 470 ntBASIC2.44□□□□□ -2.02
SCN11AQ9UI33 VIS1.1-201ENST00000610517 203 ntBASIC2.44□□□□□ -2.02
SCN11AQ9UI33 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
SCN11AQ9UI33 AC084768.2-201ENST00000622736 221 ntBASIC2.44□□□□□ -2.02
SCN11AQ9UI33 AC005517.2-201ENST00000424673 553 ntBASIC2.44□□□□□ -2.02
SCN11AQ9UI33 AL353729.1-201ENST00000425044 720 ntBASIC2.44□□□□□ -2.02
SCN11AQ9UI33 VN1R96P-201ENST00000446052 858 ntBASIC2.44□□□□□ -2.02
SCN11AQ9UI33 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.44□□□□□ -2.02
SCN11AQ9UI33 AC109486.1-201ENST00000486833 374 ntBASIC2.44□□□□□ -2.02
SCN11AQ9UI33 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.44□□□□□ -2.02
SCN11AQ9UI33 AC068781.1-201ENST00000488231 618 ntBASIC2.44□□□□□ -2.02
SCN11AQ9UI33 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.44□□□□□ -2.02
SCN11AQ9UI33 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.44□□□□□ -2.02
SCN11AQ9UI33 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.44□□□□□ -2.02
SCN11AQ9UI33 MIR4716-201ENST00000579628 84 ntBASIC2.44□□□□□ -2.02
SCN11AQ9UI33 MIR5089-201ENST00000580047 84 ntBASIC2.44□□□□□ -2.02
SCN11AQ9UI33 AC002984.1-201ENST00000591692 448 ntBASIC2.44□□□□□ -2.02
SCN11AQ9UI33 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms