Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RNU6-606P-201ENST00000384721 111 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 RNU6-882P-201ENST00000391025 103 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AC068050.1-201ENST00000394891 380 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AL121834.1-202ENST00000404494 277 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 RN7SKP27-201ENST00000410684 333 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 SNRPEP10-201ENST00000420249 274 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 RHOT1P3-201ENST00000436571 331 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AC004866.2-201ENST00000438285 481 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 RPS15AP9-201ENST00000439856 381 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 MTCO3P45-201ENST00000443036 613 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AL162388.1-201ENST00000450912 352 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 SNRPGP6-201ENST00000451124 220 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 RN7SL244P-201ENST00000493405 297 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 COX6B1P5-201ENST00000509843 249 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AC074344.1-201ENST00000512823 224 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 SNORD27.1-201ENST00000516319 72 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 SNORA40.12-201ENST00000516329 111 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AL110118.1-201ENST00000553543 400 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AL627230.1-201ENST00000613077 211 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AL450472.3-201ENST00000615578 367 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AL591926.8-201ENST00000616876 211 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 SNHG22-203ENST00000617833 660 ntBASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.44□□□□□ -1.7
CCM2LQ9NUG4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 MAPK10-263ENST00000641052 4307 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AC073343.1-201ENST00000328239 651 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 Y_RNA.22-201ENST00000362492 102 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 RNU6-867P-201ENST00000364956 107 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 RNU6-1279P-201ENST00000383917 103 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 Y_RNA.390-201ENST00000383932 102 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 RNU6-641P-201ENST00000384006 107 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 RPL18P10-201ENST00000425606 538 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 RPL21P91-201ENST00000429231 479 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 BTF3P10-201ENST00000433415 495 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AL606489.2-201ENST00000433886 234 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 RPL34P20-201ENST00000442771 351 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AC114755.5-201ENST00000447760 831 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AL356010.1-201ENST00000456364 102 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 snoU13.1-201ENST00000459157 104 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 GAPDHP56-201ENST00000506031 988 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 HMGB1P41-201ENST00000520234 440 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 IGLV3-26-201ENST00000520756 302 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 OR5BN1P-201ENST00000532955 829 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AC123904.3-201ENST00000547218 814 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 ARL2BPP2-201ENST00000550907 489 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AC125611.2-201ENST00000551907 647 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AC034105.3-201ENST00000565294 442 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AC091042.1-201ENST00000579213 173 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 MIR3667-201ENST00000581025 74 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AC015813.4-201ENST00000610469 179 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AL020991.1-201ENST00000612314 373 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AL158196.1-201ENST00000616786 434 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AL353748.2-201ENST00000622148 471 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 AC006065.6-201ENST00000625201 545 ntBASIC4.43□□□□□ -1.7
CCM2LQ9NUG4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms