Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RPL21P75-201ENST00000396599 483 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 RPL21P1-201ENST00000399532 476 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 RPL21P28-201ENST00000401418 483 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 AL592114.1-201ENST00000403842 483 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 RNA5SP344-201ENST00000411081 104 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 AC013268.2-201ENST00000420753 337 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.62□□□□□ -1.99
ABCA3Q99758 AL445669.2-201ENST00000454425 421 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 RPL7P5-201ENST00000471472 736 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 RPL21P16-201ENST00000495531 483 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 MTND4LP22-201ENST00000508209 276 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 RN7SKP5-201ENST00000517045 272 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.62□□□□□ -1.99
ABCA3Q99758 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.62□□□□□ -1.99
ABCA3Q99758 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.62□□□□□ -1.99
ABCA3Q99758 VN1R84P-201ENST00000593697 235 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 AL589994.2-201ENST00000621124 579 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
ABCA3Q99758 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ABCA3Q99758 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ABCA3Q99758 SNORA31-201ENST00000362607 130 ntBASIC2.61□□□□□ -1.99
ABCA3Q99758 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.61□□□□□ -1.99
ABCA3Q99758 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.61□□□□□ -1.99
ABCA3Q99758 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.61□□□□□ -1.99
ABCA3Q99758 RAB9AP5-201ENST00000437794 597 ntBASIC2.61□□□□□ -1.99
ABCA3Q99758 RAB9AP2-201ENST00000443911 597 ntBASIC2.61□□□□□ -1.99
ABCA3Q99758 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.61□□□□□ -1.99
ABCA3Q99758 AC008571.1-201ENST00000467232 300 ntBASIC2.61□□□□□ -1.99
ABCA3Q99758 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.61□□□□□ -1.99
ABCA3Q99758 TRMT112P2-201ENST00000512910 132 ntBASIC2.61□□□□□ -1.99
ABCA3Q99758 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC2.61□□□□□ -1.99
ABCA3Q99758 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.61□□□□□ -1.99
ABCA3Q99758 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.61□□□□□ -1.99
ABCA3Q99758 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.61□□□□□ -1.99
ABCA3Q99758 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ABCA3Q99758 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.6□□□□□ -1.99
ABCA3Q99758 SNORA26.7-201ENST00000391288 122 ntBASIC2.6□□□□□ -1.99
ABCA3Q99758 AP000275.1-201ENST00000411943 390 ntBASIC2.6□□□□□ -1.99
ABCA3Q99758 AC073464.3-201ENST00000422564 712 ntBASIC2.6□□□□□ -1.99
ABCA3Q99758 DPPA2P1-201ENST00000428060 556 ntBASIC2.6□□□□□ -1.99
ABCA3Q99758 SETP8-201ENST00000435341 628 ntBASIC2.6□□□□□ -1.99
ABCA3Q99758 HMGB1P31-201ENST00000437242 427 ntBASIC2.6□□□□□ -1.99
ABCA3Q99758 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.6□□□□□ -1.99
ABCA3Q99758 AC012181.1-201ENST00000479895 423 ntBASIC2.6□□□□□ -1.99
ABCA3Q99758 AC034268.2-201ENST00000571784 482 ntBASIC2.6□□□□□ -1.99
ABCA3Q99758 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.6□□□□□ -1.99
ABCA3Q99758 AC090897.3-201ENST00000636973 1157 ntBASIC2.6□□□□□ -1.99
ABCA3Q99758 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
ABCA3Q99758 RNU6-582P-201ENST00000362989 107 ntBASIC2.59□□□□□ -1.99
ABCA3Q99758 Y_RNA.224-201ENST00000364308 111 ntBASIC2.59□□□□□ -1.99
ABCA3Q99758 RPL23AP39-201ENST00000415533 405 ntBASIC2.59□□□□□ -1.99
ABCA3Q99758 BTF3P4-201ENST00000418852 495 ntBASIC2.59□□□□□ -1.99
ABCA3Q99758 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ABCA3Q99758 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.59□□□□□ -1.99
ABCA3Q99758 SDR42E1P3-201ENST00000438345 502 ntBASIC2.59□□□□□ -1.99
ABCA3Q99758 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.59□□□□□ -1.99
ABCA3Q99758 AP000705.1-201ENST00000454567 350 ntBASIC2.59□□□□□ -1.99
ABCA3Q99758 AP000852.1-201ENST00000472460 573 ntBASIC2.59□□□□□ -1.99
ABCA3Q99758 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.59□□□□□ -1.99
ABCA3Q99758 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.59□□□□□ -1.99
ABCA3Q99758 snoZ278.1-201ENST00000517059 112 ntBASIC2.59□□□□□ -1.99
ABCA3Q99758 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.59□□□□□ -1.99
ABCA3Q99758 AC010735.1-201ENST00000567305 1026 ntBASIC2.59□□□□□ -1.99
ABCA3Q99758 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.59□□□□□ -1.99
ABCA3Q99758 AC090425.2-201ENST00000608818 501 ntBASIC2.59□□□□□ -1.99
ABCA3Q99758 AC092447.7-201ENST00000422212 1621 ntBASIC2.59□□□□□ -1.99
ABCA3Q99758 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.59□□□□□ -2
ABCA3Q99758 RPS7P5-201ENST00000441482 581 ntBASIC2.59□□□□□ -2
ABCA3Q99758 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.59□□□□□ -2
ABCA3Q99758 HAUS1P1-201ENST00000505275 832 ntBASIC2.59□□□□□ -2
ABCA3Q99758 AC092436.3-201ENST00000511788 257 ntBASIC2.59□□□□□ -2
ABCA3Q99758 AC025881.1-201ENST00000518851 512 ntBASIC2.59□□□□□ -2
ABCA3Q99758 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.59□□□□□ -2
ABCA3Q99758 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.59□□□□□ -2
ABCA3Q99758 NF1P5-201ENST00000588287 448 ntBASIC2.59□□□□□ -2
ABCA3Q99758 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ABCA3Q99758 RNY1P14-201ENST00000384426 108 ntBASIC2.58□□□□□ -2
ABCA3Q99758 AC092473.1-201ENST00000441098 221 ntBASIC2.58□□□□□ -2
ABCA3Q99758 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.58□□□□□ -2
ABCA3Q99758 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.58□□□□□ -2
ABCA3Q99758 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.58□□□□□ -2
ABCA3Q99758 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.58□□□□□ -2
ABCA3Q99758 HMGB3P15-201ENST00000507326 574 ntBASIC2.58□□□□□ -2
ABCA3Q99758 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.58□□□□□ -2
ABCA3Q99758 SNORA31.26-201ENST00000517250 137 ntBASIC2.58□□□□□ -2
ABCA3Q99758 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.58□□□□□ -2
ABCA3Q99758 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.58□□□□□ -2
ABCA3Q99758 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.58□□□□□ -2
ABCA3Q99758 RNA5SP189-201ENST00000364920 115 ntBASIC2.57□□□□□ -2
ABCA3Q99758 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.57□□□□□ -2
ABCA3Q99758 AL138785.1-201ENST00000425821 331 ntBASIC2.57□□□□□ -2
ABCA3Q99758 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.57□□□□□ -2
ABCA3Q99758 AC129850.1-201ENST00000436203 508 ntBASIC2.57□□□□□ -2
ABCA3Q99758 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.57□□□□□ -2
ABCA3Q99758 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.57□□□□□ -2
ABCA3Q99758 OR4P1P-201ENST00000530808 1136 ntBASIC2.57□□□□□ -2
ABCA3Q99758 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.57□□□□□ -2
ABCA3Q99758 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.57□□□□□ -2
ABCA3Q99758 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.57□□□□□ -2
ABCA3Q99758 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms