Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CSMD1Q96PZ7 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CSMD1Q96PZ7 RNU6-516P-201ENST00000411381 104 ntBASIC1.6□□□□□ -2.15
CSMD1Q96PZ7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.6□□□□□ -2.15
CSMD1Q96PZ7 GSTA11P-201ENST00000452866 669 ntBASIC1.6□□□□□ -2.15
CSMD1Q96PZ7 CDC42P1-201ENST00000456658 548 ntBASIC1.6□□□□□ -2.15
CSMD1Q96PZ7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.6□□□□□ -2.15
CSMD1Q96PZ7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.6□□□□□ -2.15
CSMD1Q96PZ7 AC010297.1-201ENST00000623948 149 ntBASIC1.6□□□□□ -2.15
CSMD1Q96PZ7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.6□□□□□ -2.15
CSMD1Q96PZ7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.59□□□□□ -2.15
CSMD1Q96PZ7 AC027124.2-201ENST00000428249 105 ntBASIC1.59□□□□□ -2.15
CSMD1Q96PZ7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.59□□□□□ -2.15
CSMD1Q96PZ7 AC017099.1-201ENST00000448261 1028 ntBASIC1.59□□□□□ -2.15
CSMD1Q96PZ7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.59□□□□□ -2.15
CSMD1Q96PZ7 ATP5EP1-201ENST00000510257 156 ntBASIC1.59□□□□□ -2.15
CSMD1Q96PZ7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.59□□□□□ -2.15
CSMD1Q96PZ7 AC234775.3-201ENST00000564612 656 ntBASIC1.59□□□□□ -2.15
CSMD1Q96PZ7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.59□□□□□ -2.15
CSMD1Q96PZ7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.15
CSMD1Q96PZ7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.59□□□□□ -2.15
CSMD1Q96PZ7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.59□□□□□ -2.15
CSMD1Q96PZ7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.59□□□□□ -2.15
CSMD1Q96PZ7 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.59□□□□□ -2.15
CSMD1Q96PZ7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CSMD1Q96PZ7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
CSMD1Q96PZ7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.59□□□□□ -2.16
CSMD1Q96PZ7 RNU6-1027P-201ENST00000383998 107 ntBASIC1.59□□□□□ -2.16
CSMD1Q96PZ7 RNU6-1032P-201ENST00000384100 107 ntBASIC1.59□□□□□ -2.16
CSMD1Q96PZ7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.59□□□□□ -2.16
CSMD1Q96PZ7 RPL23AP44-201ENST00000482216 473 ntBASIC1.59□□□□□ -2.16
CSMD1Q96PZ7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.59□□□□□ -2.16
CSMD1Q96PZ7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.59□□□□□ -2.16
CSMD1Q96PZ7 AC093331.1-201ENST00000521474 169 ntBASIC1.59□□□□□ -2.16
CSMD1Q96PZ7 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.59□□□□□ -2.16
CSMD1Q96PZ7 MYL12BP1-201ENST00000569826 507 ntBASIC1.59□□□□□ -2.16
CSMD1Q96PZ7 AP000787.2-201ENST00000604432 568 ntBASIC1.59□□□□□ -2.16
CSMD1Q96PZ7 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.59□□□□□ -2.16
CSMD1Q96PZ7 AC099654.11-201ENST00000638857 294 ntBASIC1.59□□□□□ -2.16
CSMD1Q96PZ7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC1.59□□□□□ -2.16
CSMD1Q96PZ7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
CSMD1Q96PZ7 AL353746.1-201ENST00000566293 6881 ntBASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 PIGFP3-201ENST00000441918 722 ntBASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 Z99714.1-201ENST00000450463 807 ntBASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 AC116158.1-201ENST00000560231 2129 ntBASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 OR10AB1P-201ENST00000609613 938 ntBASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 AL137847.3-201ENST00000611521 109 ntBASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 RNU6-1105P-201ENST00000384774 107 ntBASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 GTF2IP9-201ENST00000502460 301 ntBASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 RNU6-882P-201ENST00000391025 103 ntBASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 AC008126.1-201ENST00000549019 480 ntBASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 AC131902.3-201ENST00000611767 581 ntBASIC1.58□□□□□ -2.16
CSMD1Q96PZ7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 AC129850.1-201ENST00000436203 508 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 CBWD4P-201ENST00000445695 655 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 AC104564.1-201ENST00000493028 407 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 HPVC1-201ENST00000629899 1198 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 AC022336.2-201ENST00000568966 2538 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 AC010680.1-201ENST00000590024 3590 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 MIR6073-201ENST00000352083 89 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 MIR1294-201ENST00000408503 142 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 U3.37-201ENST00000408528 213 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 IGHV3-76-201ENST00000522465 295 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 RFPL1S-203ENST00000539579 330 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 NIFKP8-201ENST00000560500 874 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 MIR4421-201ENST00000578133 69 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 AL035411.2-201ENST00000604022 421 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 AL645939.4-201ENST00000604495 135 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 AL008729.2-201ENST00000606393 473 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 Y_RNA.303-201ENST00000364998 94 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 EXTL2P1-201ENST00000446218 416 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 ARL4AP2-201ENST00000507378 601 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 AC006390.1-201ENST00000508068 283 ntBASIC1.57□□□□□ -2.16
CSMD1Q96PZ7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms