Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
PDLIM5Q96HC4 DUXAP1-201ENST00000556632 463 ntBASIC3.43□□□□□ -1.86
PDLIM5Q96HC4 OR4K7P-201ENST00000580232 945 ntBASIC3.43□□□□□ -1.86
PDLIM5Q96HC4 AC093227.2-201ENST00000589357 285 ntBASIC3.43□□□□□ -1.86
PDLIM5Q96HC4 AL451074.6-201ENST00000608512 729 ntBASIC3.43□□□□□ -1.86
PDLIM5Q96HC4 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.43□□□□□ -1.86
PDLIM5Q96HC4 AL357559.1-201ENST00000622228 274 ntBASIC3.43□□□□□ -1.86
PDLIM5Q96HC4 AC078883.4-201ENST00000623218 367 ntBASIC3.43□□□□□ -1.86
PDLIM5Q96HC4 AP000676.3-201ENST00000623299 569 ntBASIC3.43□□□□□ -1.86
PDLIM5Q96HC4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.43□□□□□ -1.86
PDLIM5Q96HC4 AC007490.1-201ENST00000624321 703 ntBASIC3.43□□□□□ -1.86
PDLIM5Q96HC4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.43□□□□□ -1.86
PDLIM5Q96HC4 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.43□□□□□ -1.86
PDLIM5Q96HC4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDLIM5Q96HC4 OR5BR1P-201ENST00000524992 1330 ntBASIC3.43□□□□□ -1.86
PDLIM5Q96HC4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDLIM5Q96HC4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 SNORD116-2-201ENST00000384274 95 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 SNORA1.3-201ENST00000384676 136 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 SNORD116-6-201ENST00000384711 96 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 DHFRP6-201ENST00000401776 268 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AC068533.2-201ENST00000411872 306 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 DBIP2-201ENST00000419076 262 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 MTND2P18-201ENST00000419962 1030 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AC006960.1-201ENST00000419980 153 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 CDC27P1-201ENST00000445384 715 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AL133217.1-201ENST00000450980 425 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AC073387.1-201ENST00000453261 709 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 RBMY2UP-201ENST00000453474 324 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AL122001.1-201ENST00000457027 370 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 RPL30P14-201ENST00000482744 348 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AC108860.1-201ENST00000484521 383 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 RPS3AP22-201ENST00000488297 769 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AC079395.1-201ENST00000510981 262 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 MRPS33P3-201ENST00000513456 322 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 RNU1-95P-201ENST00000516357 160 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 Y_RNA.688-201ENST00000516565 95 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 SNORA70.18-201ENST00000516696 98 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 RNU1-128P-201ENST00000516704 160 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 FAM60DP-201ENST00000524174 632 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AL512347.1-201ENST00000566420 503 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 MIR3921-201ENST00000577308 85 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 MIR3186-201ENST00000577404 85 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AL139418.1-201ENST00000613613 177 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AL121772.2-201ENST00000614331 297 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AC131159.1-201ENST00000621854 213 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AC092628.2-201ENST00000622492 339 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 MFSD8-236ENST00000641509 4050 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 MTCO1P9-201ENST00000505577 1534 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 PWAR6-201ENST00000552334 4618 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AL353746.1-201ENST00000566293 6881 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
PDLIM5Q96HC4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC032011.1-201ENST00000611703 1549 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 Y_RNA.169-201ENST00000363745 96 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 MIR493-201ENST00000385254 89 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 TAF9BP1-201ENST00000396646 746 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 ATP5F1P3-201ENST00000397213 657 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 RPS4XP3-201ENST00000398541 413 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AL445189.1-201ENST00000405722 338 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AL354719.1-201ENST00000406535 843 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 RNU6-757P-201ENST00000410334 100 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 RNU6-55P-201ENST00000411092 107 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 RNU6-954P-201ENST00000411355 107 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 SYF2P2-201ENST00000417620 583 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 RPL31P12-201ENST00000422587 358 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 MTATP6P4-201ENST00000427725 675 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC007389.2-201ENST00000434630 306 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms