Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC024153.1-201ENST00000603103 365 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 XIAPP1-201ENST00000603162 600 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 AC019159.1-201ENST00000605094 187 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 AC008962.1-201ENST00000605729 304 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 AC018926.1-201ENST00000616335 435 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 AC073968.1-201ENST00000618594 637 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 AC006963.1-201ENST00000624003 1052 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 Y_RNA.333-201ENST00000365274 102 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AL121972.1-201ENST00000402023 252 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AC092634.6-201ENST00000418558 192 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AL139132.1-201ENST00000431587 344 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AC241584.1-201ENST00000438469 1241 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 TRBV26-201ENST00000456572 344 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 snoU13.22-201ENST00000459428 104 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 SNORA31.20-201ENST00000517111 133 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 ZNF705CP-201ENST00000530515 889 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AP001317.1-201ENST00000531194 960 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 LSM6P2-201ENST00000552208 177 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AC044913.1-201ENST00000557200 430 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AC090695.1-201ENST00000561269 1222 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AC093519.1-201ENST00000566109 298 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AC006504.3-201ENST00000586818 523 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AC012119.1-201ENST00000603184 222 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 AC093732.2-201ENST00000607950 274 ntBASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC65Q8IXS2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 VTRNA1-1-201ENST00000363120 99 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 RNU6-236P-201ENST00000363886 106 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 SNORA51.6-201ENST00000384151 125 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 RNU6-837P-201ENST00000391056 108 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 U3.29-201ENST00000391296 212 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 UBA52P6-201ENST00000399822 382 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 MTND4P13-201ENST00000402078 1023 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 AL133264.1-201ENST00000407157 562 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 AL023807.1-201ENST00000407932 359 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 AL133384.1-201ENST00000412744 351 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 RPS7P9-201ENST00000414704 586 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 LUZP4P1-201ENST00000415420 344 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 YPEL5P1-201ENST00000419731 367 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 AL513043.1-201ENST00000439124 535 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 NANOGNBP1-201ENST00000448444 480 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 RPS29P12-201ENST00000460178 152 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 VPS26AP1-201ENST00000483197 979 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 AC117522.3-201ENST00000507974 584 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 AC087897.1-201ENST00000550134 156 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 AP002802.2-201ENST00000605877 235 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 AC009318.4-201ENST00000620496 486 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 MTND2P41-201ENST00000637599 773 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 ZNF807-201ENST00000328088 1707 ntBASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC65Q8IXS2 AC091564.4-201ENST00000533934 2194 ntBASIC3.11□□□□□ -1.91
CCDC65Q8IXS2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC65Q8IXS2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC65Q8IXS2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC65Q8IXS2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC65Q8IXS2 MIR26A1-201ENST00000362205 77 ntBASIC3.11□□□□□ -1.91
CCDC65Q8IXS2 RNU6-799P-201ENST00000363567 107 ntBASIC3.11□□□□□ -1.91
CCDC65Q8IXS2 SNORA44-201ENST00000384584 132 ntBASIC3.11□□□□□ -1.91
CCDC65Q8IXS2 MIR491-201ENST00000384877 84 ntBASIC3.11□□□□□ -1.91
CCDC65Q8IXS2 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC65Q8IXS2 BX682237.1-201ENST00000415016 335 ntBASIC3.11□□□□□ -1.91
CCDC65Q8IXS2 AL096701.2-201ENST00000416920 238 ntBASIC3.11□□□□□ -1.91
CCDC65Q8IXS2 C1DP1-201ENST00000426049 402 ntBASIC3.11□□□□□ -1.91
CCDC65Q8IXS2 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC65Q8IXS2 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC65Q8IXS2 AC112653.1-201ENST00000443851 386 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms