Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.15□□□□□ -1.9
HMGXB3Q12766 VIS1.1-201ENST00000610517 203 ntBASIC3.15□□□□□ -1.9
HMGXB3Q12766 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.15□□□□□ -1.9
HMGXB3Q12766 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.15□□□□□ -1.9
HMGXB3Q12766 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGXB3Q12766 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGXB3Q12766 AC013404.1-201ENST00000413068 249 ntBASIC3.14□□□□□ -1.91
HMGXB3Q12766 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HMGXB3Q12766 RPL23AP7-203ENST00000449021 469 ntBASIC3.14□□□□□ -1.91
HMGXB3Q12766 AC079804.2-201ENST00000490376 200 ntBASIC3.14□□□□□ -1.91
HMGXB3Q12766 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGXB3Q12766 AC017076.1-201ENST00000607613 578 ntBASIC3.14□□□□□ -1.91
HMGXB3Q12766 AL512598.1-201ENST00000610158 273 ntBASIC3.14□□□□□ -1.91
HMGXB3Q12766 MIR6779-201ENST00000617283 64 ntBASIC3.14□□□□□ -1.91
HMGXB3Q12766 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGXB3Q12766 AC103988.1-201ENST00000566382 2177 ntBASIC3.14□□□□□ -1.91
HMGXB3Q12766 AC092447.7-201ENST00000422212 1621 ntBASIC3.14□□□□□ -1.91
HMGXB3Q12766 RNA5SP325-201ENST00000363756 130 ntBASIC3.14□□□□□ -1.91
HMGXB3Q12766 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGXB3Q12766 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGXB3Q12766 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGXB3Q12766 AC004486.1-201ENST00000546846 233 ntBASIC3.14□□□□□ -1.91
HMGXB3Q12766 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGXB3Q12766 AL353748.2-201ENST00000622148 471 ntBASIC3.14□□□□□ -1.91
HMGXB3Q12766 AC106730.3-201ENST00000624568 641 ntBASIC3.14□□□□□ -1.91
HMGXB3Q12766 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HMGXB3Q12766 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGXB3Q12766 UBE2L2-201ENST00000254302 429 ntBASIC3.13□□□□□ -1.91
HMGXB3Q12766 Y_RNA.112-201ENST00000363250 102 ntBASIC3.13□□□□□ -1.91
HMGXB3Q12766 AF274854.1-201ENST00000413236 615 ntBASIC3.13□□□□□ -1.91
HMGXB3Q12766 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGXB3Q12766 MTCO3P21-201ENST00000430791 643 ntBASIC3.13□□□□□ -1.91
HMGXB3Q12766 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGXB3Q12766 CFTRP1-201ENST00000456646 183 ntBASIC3.13□□□□□ -1.91
HMGXB3Q12766 AP000926.1-201ENST00000479573 241 ntBASIC3.13□□□□□ -1.91
HMGXB3Q12766 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HMGXB3Q12766 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGXB3Q12766 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGXB3Q12766 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HMGXB3Q12766 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.12□□□□□ -1.91
HMGXB3Q12766 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGXB3Q12766 TOMM22P6-201ENST00000465035 409 ntBASIC3.12□□□□□ -1.91
HMGXB3Q12766 SNORA4-201ENST00000584302 138 ntBASIC3.12□□□□□ -1.91
HMGXB3Q12766 U6.98-201ENST00000637157 84 ntBASIC3.12□□□□□ -1.91
HMGXB3Q12766 AP001486.2-201ENST00000561652 5113 ntBASIC3.12□□□□□ -1.91
HMGXB3Q12766 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGXB3Q12766 RNA5SP27-201ENST00000363839 119 ntBASIC3.11□□□□□ -1.91
HMGXB3Q12766 AL513331.1-201ENST00000411908 397 ntBASIC3.11□□□□□ -1.91
HMGXB3Q12766 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGXB3Q12766 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGXB3Q12766 AC025033.1-201ENST00000463883 194 ntBASIC3.11□□□□□ -1.91
HMGXB3Q12766 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGXB3Q12766 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGXB3Q12766 RNU6-826P-201ENST00000516827 104 ntBASIC3.11□□□□□ -1.91
HMGXB3Q12766 RN7SKP40-201ENST00000517211 242 ntBASIC3.11□□□□□ -1.91
HMGXB3Q12766 MTND5P35-201ENST00000557537 1720 ntBASIC3.1□□□□□ -1.91
HMGXB3Q12766 RNA5SP160-201ENST00000364866 120 ntBASIC3.1□□□□□ -1.91
HMGXB3Q12766 BTBD10P2-201ENST00000404779 676 ntBASIC3.1□□□□□ -1.91
HMGXB3Q12766 USP9YP6-201ENST00000413550 854 ntBASIC3.1□□□□□ -1.91
HMGXB3Q12766 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGXB3Q12766 USP9YP34-201ENST00000453983 808 ntBASIC3.1□□□□□ -1.91
HMGXB3Q12766 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGXB3Q12766 MTCYBP17-201ENST00000503579 789 ntBASIC3.1□□□□□ -1.91
HMGXB3Q12766 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGXB3Q12766 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGXB3Q12766 AL627309.6-201ENST00000606857 840 ntBASIC3.1□□□□□ -1.91
HMGXB3Q12766 AC012360.2-201ENST00000609349 391 ntBASIC3.1□□□□□ -1.91
HMGXB3Q12766 RMST_2.1-201ENST00000617263 136 ntBASIC3.1□□□□□ -1.91
HMGXB3Q12766 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.09□□□□□ -1.91
HMGXB3Q12766 HIGD1AP11-201ENST00000438361 280 ntBASIC3.09□□□□□ -1.91
HMGXB3Q12766 XKRY2-201ENST00000442362 1093 ntBASIC3.09□□□□□ -1.91
HMGXB3Q12766 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.09□□□□□ -1.91
HMGXB3Q12766 AC098848.2-201ENST00000588023 330 ntBASIC3.09□□□□□ -1.91
HMGXB3Q12766 MIR502-201ENST00000606349 86 ntBASIC3.09□□□□□ -1.91
HMGXB3Q12766 AP002967.1-201ENST00000624203 539 ntBASIC3.09□□□□□ -1.91
HMGXB3Q12766 SNORA50A-202ENST00000629536 136 ntBASIC3.09□□□□□ -1.91
HMGXB3Q12766 POLHP1-201ENST00000411806 470 ntBASIC3.09□□□□□ -1.92
HMGXB3Q12766 AL138785.1-201ENST00000425821 331 ntBASIC3.09□□□□□ -1.92
HMGXB3Q12766 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.09□□□□□ -1.92
HMGXB3Q12766 SNRPFP4-201ENST00000456366 242 ntBASIC3.09□□□□□ -1.92
HMGXB3Q12766 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
HMGXB3Q12766 RPS3AP23-202ENST00000574601 686 ntBASIC3.09□□□□□ -1.92
HMGXB3Q12766 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.09□□□□□ -1.92
HMGXB3Q12766 AL645939.4-201ENST00000604495 135 ntBASIC3.09□□□□□ -1.92
HMGXB3Q12766 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.09□□□□□ -1.92
HMGXB3Q12766 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.09□□□□□ -1.92
HMGXB3Q12766 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HMGXB3Q12766 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGXB3Q12766 AL391987.6-201ENST00000305671 199 ntBASIC3.08□□□□□ -1.92
HMGXB3Q12766 RNU6-707P-201ENST00000364647 95 ntBASIC3.08□□□□□ -1.92
HMGXB3Q12766 AL353597.2-202ENST00000434901 373 ntBASIC3.08□□□□□ -1.92
HMGXB3Q12766 HMGB1P12-201ENST00000438594 598 ntBASIC3.08□□□□□ -1.92
HMGXB3Q12766 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGXB3Q12766 TRAV31-201ENST00000502780 342 ntBASIC3.08□□□□□ -1.92
HMGXB3Q12766 AC092436.3-201ENST00000511788 257 ntBASIC3.08□□□□□ -1.92
HMGXB3Q12766 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HMGXB3Q12766 MTND5P21-201ENST00000531961 522 ntBASIC3.08□□□□□ -1.92
HMGXB3Q12766 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGXB3Q12766 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HMGXB3Q12766 HPVC1-201ENST00000629899 1198 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms