Protein–RNA interactions for Protein: Q09028

RBBP4, Histone-binding protein RBBP4, humanhuman

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4Q09028 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RBBP4Q09028 RNU6-433P-201ENST00000363216 104 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RBBP4Q09028 RNA5SP293-201ENST00000410527 113 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RBBP4Q09028 DBIP2-201ENST00000419076 262 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 AL035423.1-201ENST00000420331 213 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.18□□□□□ -1.9
RBBP4Q09028 MTCO2P5-201ENST00000422621 426 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.18□□□□□ -1.9
RBBP4Q09028 AL117351.1-201ENST00000438864 766 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RBBP4Q09028 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.18□□□□□ -1.9
RBBP4Q09028 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.18□□□□□ -1.9
RBBP4Q09028 Z95327.1-201ENST00000446082 482 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 AC002381.1-201ENST00000447049 280 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.18□□□□□ -1.9
RBBP4Q09028 MTCO2P6-201ENST00000463134 685 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 RPS4XP10-201ENST00000465034 731 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.18□□□□□ -1.9
RBBP4Q09028 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.18□□□□□ -1.9
RBBP4Q09028 COX7A2P2-201ENST00000505291 250 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 AC112198.1-201ENST00000505369 1220 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.18□□□□□ -1.9
RBBP4Q09028 LTV1P1-201ENST00000510683 1237 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 MTCYBP43-201ENST00000513621 740 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.18□□□□□ -1.9
RBBP4Q09028 RN7SKP18-201ENST00000516005 275 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 SNORA70.18-201ENST00000516696 98 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.18□□□□□ -1.9
RBBP4Q09028 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.18□□□□□ -1.9
RBBP4Q09028 COX6CP8-201ENST00000522620 226 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.18□□□□□ -1.9
RBBP4Q09028 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.18□□□□□ -1.9
RBBP4Q09028 OR7K1P-201ENST00000546439 926 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 AC126177.3-201ENST00000551839 688 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.18□□□□□ -1.9
RBBP4Q09028 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.18□□□□□ -1.9
RBBP4Q09028 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.18□□□□□ -1.9
RBBP4Q09028 AC067852.3-201ENST00000589177 561 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 AC008751.2-201ENST00000597885 980 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 VN1R92P-201ENST00000598511 928 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 AC006539.2-201ENST00000601729 572 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 ELOCP35-201ENST00000604289 336 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 AC018714.1-201ENST00000605028 208 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 AC128687.1-201ENST00000605304 619 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 AC006023.2-201ENST00000609916 167 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.18□□□□□ -1.9
RBBP4Q09028 AL596245.1-201ENST00000618994 362 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 AC131159.1-201ENST00000621854 213 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 AP003485.2-201ENST00000623636 610 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RBBP4Q09028 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.18□□□□□ -1.9
RBBP4Q09028 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RBBP4Q09028 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RBBP4Q09028 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RBBP4Q09028 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.18□□□□□ -1.9
RBBP4Q09028 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RBBP4Q09028 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RBBP4Q09028 AC005183.1-201ENST00000603687 1979 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 AC011477.1-204ENST00000623416 1325 ntBASIC3.18□□□□□ -1.9
RBBP4Q09028 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.17□□□□□ -1.9
RBBP4Q09028 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.17□□□□□ -1.9
RBBP4Q09028 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RBBP4Q09028 AC092326.2-201ENST00000624772 1561 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RBBP4Q09028 AC087359.1-201ENST00000508335 1740 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RBBP4Q09028 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RBBP4Q09028 U3.11-201ENST00000364476 212 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 SNORD3H-201ENST00000384486 214 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RBBP4Q09028 RPL21P17-201ENST00000397467 475 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 AL590084.2-201ENST00000401481 382 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 AC107081.1-201ENST00000414975 361 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.17□□□□□ -1.9
RBBP4Q09028 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.17□□□□□ -1.9
RBBP4Q09028 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.17□□□□□ -1.9
RBBP4Q09028 AC018644.1-201ENST00000429934 551 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.17□□□□□ -1.9
RBBP4Q09028 VDAC1P3-201ENST00000434069 851 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 HMGB3P11-201ENST00000440127 604 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 MTND5P2-201ENST00000442927 1142 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 AL133547.1-201ENST00000448546 220 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 AC125238.1-201ENST00000448842 249 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 AC098826.2-201ENST00000452011 651 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 AC073387.1-201ENST00000453261 709 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.17□□□□□ -1.9
RBBP4Q09028 ARPC3P2-201ENST00000457786 533 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 RPS27AP1-201ENST00000475545 471 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 AC012181.1-201ENST00000479895 423 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 AC104685.1-201ENST00000502445 371 ntBASIC3.17□□□□□ -1.9
RBBP4Q09028 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.17□□□□□ -1.9
RBBP4Q09028 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.17□□□□□ -1.9
RBBP4Q09028 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.17□□□□□ -1.9
RBBP4Q09028 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.17□□□□□ -1.9
RBBP4Q09028 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.17□□□□□ -1.9
RBBP4Q09028 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.17□□□□□ -1.9
RBBP4Q09028 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms