Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC231759.1-201ENST00000616455 597 ntBASIC2.59□□□□□ -1.99
RPA3P35244 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RPA3P35244 AC079228.1-201ENST00000624774 1049 ntBASIC2.59□□□□□ -1.99
RPA3P35244 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.59□□□□□ -1.99
RPA3P35244 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RPA3P35244 AC233263.6-201ENST00000631132 1963 ntBASIC2.59□□□□□ -2
RPA3P35244 MFSD8-213ENST00000641134 1327 ntBASIC2.59□□□□□ -2
RPA3P35244 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.59□□□□□ -2
RPA3P35244 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.59□□□□□ -2
RPA3P35244 AC011460.1-201ENST00000636268 1834 ntBASIC2.58□□□□□ -2
RPA3P35244 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.58□□□□□ -2
RPA3P35244 AL672167.1-206ENST00000356293 943 ntBASIC2.58□□□□□ -2
RPA3P35244 RNU6-859P-201ENST00000362728 107 ntBASIC2.58□□□□□ -2
RPA3P35244 SNORA5B-201ENST00000363786 132 ntBASIC2.58□□□□□ -2
RPA3P35244 U8.8-201ENST00000365399 135 ntBASIC2.58□□□□□ -2
RPA3P35244 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.58□□□□□ -2
RPA3P35244 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.58□□□□□ -2
RPA3P35244 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.58□□□□□ -2
RPA3P35244 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.58□□□□□ -2
RPA3P35244 VN1R42P-201ENST00000424651 344 ntBASIC2.58□□□□□ -2
RPA3P35244 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.58□□□□□ -2
RPA3P35244 RPS12P2-201ENST00000439728 269 ntBASIC2.58□□□□□ -2
RPA3P35244 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.58□□□□□ -2
RPA3P35244 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.58□□□□□ -2
RPA3P35244 RPS20P24-201ENST00000457473 361 ntBASIC2.58□□□□□ -2
RPA3P35244 AL031183.1-201ENST00000457667 207 ntBASIC2.58□□□□□ -2
RPA3P35244 SNORD109B-201ENST00000458961 67 ntBASIC2.58□□□□□ -2
RPA3P35244 SNORD109A-201ENST00000459128 67 ntBASIC2.58□□□□□ -2
RPA3P35244 PABPC1P3-201ENST00000469174 459 ntBASIC2.58□□□□□ -2
RPA3P35244 AC087190.1-201ENST00000484462 480 ntBASIC2.58□□□□□ -2
RPA3P35244 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.58□□□□□ -2
RPA3P35244 PRELID3BP4-201ENST00000515476 571 ntBASIC2.58□□□□□ -2
RPA3P35244 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.58□□□□□ -2
RPA3P35244 AC025881.1-201ENST00000518851 512 ntBASIC2.58□□□□□ -2
RPA3P35244 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.58□□□□□ -2
RPA3P35244 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.58□□□□□ -2
RPA3P35244 AP000790.1-201ENST00000528891 737 ntBASIC2.58□□□□□ -2
RPA3P35244 OR4P1P-201ENST00000530808 1136 ntBASIC2.58□□□□□ -2
RPA3P35244 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.58□□□□□ -2
RPA3P35244 LSM6P2-201ENST00000552208 177 ntBASIC2.58□□□□□ -2
RPA3P35244 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.58□□□□□ -2
RPA3P35244 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.58□□□□□ -2
RPA3P35244 AL035413.2-201ENST00000604801 525 ntBASIC2.58□□□□□ -2
RPA3P35244 AL137843.1-201ENST00000605078 385 ntBASIC2.58□□□□□ -2
RPA3P35244 AC245100.7-201ENST00000609678 442 ntBASIC2.58□□□□□ -2
RPA3P35244 AL137847.3-201ENST00000611521 109 ntBASIC2.58□□□□□ -2
RPA3P35244 AC104307.1-201ENST00000616142 196 ntBASIC2.58□□□□□ -2
RPA3P35244 AC006213.5-201ENST00000619673 288 ntBASIC2.58□□□□□ -2
RPA3P35244 AP000676.4-201ENST00000624659 623 ntBASIC2.58□□□□□ -2
RPA3P35244 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.58□□□□□ -2
RPA3P35244 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RPA3P35244 AL049780.3-201ENST00000624612 1583 ntBASIC2.57□□□□□ -2
RPA3P35244 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RPA3P35244 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
RPA3P35244 FRG1BP-201ENST00000278882 761 ntBASIC2.57□□□□□ -2
RPA3P35244 SNORD56.4-201ENST00000363883 71 ntBASIC2.57□□□□□ -2
RPA3P35244 SNORD82-201ENST00000365530 70 ntBASIC2.57□□□□□ -2
RPA3P35244 RNA5SP252-201ENST00000391131 119 ntBASIC2.57□□□□□ -2
RPA3P35244 AL356057.3-201ENST00000402607 340 ntBASIC2.57□□□□□ -2
RPA3P35244 AL139095.1-201ENST00000404326 391 ntBASIC2.57□□□□□ -2
RPA3P35244 AC092638.1-201ENST00000411966 1275 ntBASIC2.57□□□□□ -2
RPA3P35244 RPS6P14-201ENST00000425165 719 ntBASIC2.57□□□□□ -2
RPA3P35244 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.57□□□□□ -2
RPA3P35244 AC012497.1-201ENST00000429392 575 ntBASIC2.57□□□□□ -2
RPA3P35244 ZFAND6P1-201ENST00000434138 605 ntBASIC2.57□□□□□ -2
RPA3P35244 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.57□□□□□ -2
RPA3P35244 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.57□□□□□ -2
RPA3P35244 RPL23AP58-201ENST00000440453 469 ntBASIC2.57□□□□□ -2
RPA3P35244 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.57□□□□□ -2
RPA3P35244 MTND2P19-201ENST00000449129 1012 ntBASIC2.57□□□□□ -2
RPA3P35244 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.57□□□□□ -2
RPA3P35244 VPS26AP1-201ENST00000483197 979 ntBASIC2.57□□□□□ -2
RPA3P35244 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.57□□□□□ -2
RPA3P35244 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.57□□□□□ -2
RPA3P35244 AC034159.1-201ENST00000513885 583 ntBASIC2.57□□□□□ -2
RPA3P35244 SETP12-201ENST00000514068 805 ntBASIC2.57□□□□□ -2
RPA3P35244 AC096725.1-201ENST00000514266 313 ntBASIC2.57□□□□□ -2
RPA3P35244 RNU6-56P-201ENST00000516986 93 ntBASIC2.57□□□□□ -2
RPA3P35244 AP003102.1-201ENST00000525638 661 ntBASIC2.57□□□□□ -2
RPA3P35244 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.57□□□□□ -2
RPA3P35244 AC104229.1-201ENST00000561364 255 ntBASIC2.57□□□□□ -2
RPA3P35244 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.57□□□□□ -2
RPA3P35244 OR2AS2P-201ENST00000606902 342 ntBASIC2.57□□□□□ -2
RPA3P35244 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.57□□□□□ -2
RPA3P35244 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.57□□□□□ -2
RPA3P35244 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RPA3P35244 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.57□□□□□ -2
RPA3P35244 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
RPA3P35244 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RPA3P35244 OR5T3-201ENST00000303059 1023 ntBASIC2.56□□□□□ -2
RPA3P35244 OR51A3P-201ENST00000413596 924 ntBASIC2.56□□□□□ -2
RPA3P35244 AL096701.2-201ENST00000416920 238 ntBASIC2.56□□□□□ -2
RPA3P35244 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.56□□□□□ -2
RPA3P35244 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.56□□□□□ -2
RPA3P35244 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.56□□□□□ -2
RPA3P35244 AC063976.3-201ENST00000426849 329 ntBASIC2.56□□□□□ -2
RPA3P35244 ARL5AP4-201ENST00000430731 512 ntBASIC2.56□□□□□ -2
RPA3P35244 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.56□□□□□ -2
RPA3P35244 RPL30P14-201ENST00000482744 348 ntBASIC2.56□□□□□ -2
RPA3P35244 RNA5SP356-201ENST00000515972 94 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 217.1 ms