Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NID1P14543 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.21□□□□□ -1.58
NID1P14543 Y_RNA.48-201ENST00000362710 103 ntBASIC5.21□□□□□ -1.58
NID1P14543 Y_RNA.83-201ENST00000363005 113 ntBASIC5.21□□□□□ -1.58
NID1P14543 RNA5SP326-201ENST00000363209 110 ntBASIC5.21□□□□□ -1.58
NID1P14543 Y_RNA.269-201ENST00000364685 89 ntBASIC5.21□□□□□ -1.58
NID1P14543 RNU6-1293P-201ENST00000384077 107 ntBASIC5.21□□□□□ -1.58
NID1P14543 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NID1P14543 AL139039.1-201ENST00000401900 692 ntBASIC5.21□□□□□ -1.58
NID1P14543 MRPL35P1-201ENST00000404272 572 ntBASIC5.21□□□□□ -1.58
NID1P14543 RPS3AP2-201ENST00000407190 754 ntBASIC5.21□□□□□ -1.58
NID1P14543 AC069213.2-201ENST00000420238 366 ntBASIC5.21□□□□□ -1.58
NID1P14543 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.21□□□□□ -1.58
NID1P14543 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.21□□□□□ -1.58
NID1P14543 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.21□□□□□ -1.58
NID1P14543 LINC02210-201ENST00000444561 288 ntBASIC5.21□□□□□ -1.58
NID1P14543 RNU7-120P-201ENST00000459334 63 ntBASIC5.21□□□□□ -1.58
NID1P14543 RN7SL197P-201ENST00000466981 299 ntBASIC5.21□□□□□ -1.58
NID1P14543 RPL21P6-201ENST00000479171 504 ntBASIC5.21□□□□□ -1.58
NID1P14543 AC098869.1-201ENST00000481627 292 ntBASIC5.21□□□□□ -1.58
NID1P14543 AC110792.1-201ENST00000491826 472 ntBASIC5.21□□□□□ -1.58
NID1P14543 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.21□□□□□ -1.58
NID1P14543 AC100870.1-201ENST00000522035 505 ntBASIC5.21□□□□□ -1.58
NID1P14543 CBX3P8-201ENST00000532412 525 ntBASIC5.21□□□□□ -1.58
NID1P14543 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.21□□□□□ -1.58
NID1P14543 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.21□□□□□ -1.58
NID1P14543 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.21□□□□□ -1.58
NID1P14543 RN7SL802P-201ENST00000577858 299 ntBASIC5.21□□□□□ -1.58
NID1P14543 MIR4311-201ENST00000580794 100 ntBASIC5.21□□□□□ -1.58
NID1P14543 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.21□□□□□ -1.58
NID1P14543 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.21□□□□□ -1.58
NID1P14543 AC004832.4-201ENST00000608952 331 ntBASIC5.21□□□□□ -1.58
NID1P14543 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.21□□□□□ -1.58
NID1P14543 RNU6-156P-201ENST00000621869 107 ntBASIC5.21□□□□□ -1.58
NID1P14543 AL161637.1-201ENST00000622380 412 ntBASIC5.21□□□□□ -1.58
NID1P14543 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NID1P14543 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.21□□□□□ -1.58
NID1P14543 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.21□□□□□ -1.58
NID1P14543 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NID1P14543 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
NID1P14543 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NID1P14543 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NID1P14543 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NID1P14543 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.21□□□□□ -1.58
NID1P14543 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
NID1P14543 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.21□□□□□ -1.58
NID1P14543 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
NID1P14543 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NID1P14543 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NID1P14543 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NID1P14543 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NID1P14543 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NID1P14543 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NID1P14543 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NID1P14543 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NID1P14543 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NID1P14543 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NID1P14543 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.2□□□□□ -1.58
NID1P14543 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.2□□□□□ -1.58
NID1P14543 AC140134.1-201ENST00000511830 3544 ntBASIC5.2□□□□□ -1.58
NID1P14543 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
NID1P14543 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.2□□□□□ -1.58
NID1P14543 RNU1-130P-201ENST00000363930 160 ntBASIC5.2□□□□□ -1.58
NID1P14543 Y_RNA.277-201ENST00000364754 102 ntBASIC5.2□□□□□ -1.58
NID1P14543 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
NID1P14543 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.2□□□□□ -1.58
NID1P14543 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.2□□□□□ -1.58
NID1P14543 EIF1P2-201ENST00000428233 350 ntBASIC5.2□□□□□ -1.58
NID1P14543 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.2□□□□□ -1.58
NID1P14543 AC064862.4-201ENST00000442180 334 ntBASIC5.2□□□□□ -1.58
NID1P14543 CYCSP51-201ENST00000443545 318 ntBASIC5.2□□□□□ -1.58
NID1P14543 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.2□□□□□ -1.58
NID1P14543 AL445665.1-202ENST00000452436 324 ntBASIC5.2□□□□□ -1.58
NID1P14543 RN7SL515P-201ENST00000463999 297 ntBASIC5.2□□□□□ -1.58
NID1P14543 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.2□□□□□ -1.58
NID1P14543 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.2□□□□□ -1.58
NID1P14543 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.2□□□□□ -1.58
NID1P14543 Y_RNA.687-201ENST00000516558 91 ntBASIC5.2□□□□□ -1.58
NID1P14543 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.2□□□□□ -1.58
NID1P14543 CDH12P4-201ENST00000517835 295 ntBASIC5.2□□□□□ -1.58
NID1P14543 CDH12P3-201ENST00000517935 295 ntBASIC5.2□□□□□ -1.58
NID1P14543 CDH12P1-201ENST00000518435 295 ntBASIC5.2□□□□□ -1.58
NID1P14543 DEFB108D-201ENST00000527787 222 ntBASIC5.2□□□□□ -1.58
NID1P14543 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.2□□□□□ -1.58
NID1P14543 AC122688.1-201ENST00000541494 223 ntBASIC5.2□□□□□ -1.58
NID1P14543 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.2□□□□□ -1.58
NID1P14543 AC009852.2-201ENST00000567898 485 ntBASIC5.2□□□□□ -1.58
NID1P14543 MIR4273-201ENST00000582824 84 ntBASIC5.2□□□□□ -1.58
NID1P14543 AC006363.1-201ENST00000603806 463 ntBASIC5.2□□□□□ -1.58
NID1P14543 AL450472.1-202ENST00000637286 180 ntBASIC5.2□□□□□ -1.58
NID1P14543 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NID1P14543 SMG1P7-201ENST00000565246 2704 ntBASIC5.2□□□□□ -1.58
NID1P14543 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NID1P14543 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.2□□□□□ -1.58
NID1P14543 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NID1P14543 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NID1P14543 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.19□□□□□ -1.58
NID1P14543 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NID1P14543 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
NID1P14543 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms