Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 VN1R83P-201ENST00000595685 445 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.51□□□□□ -1.85
COL2A1P02458 U73023.1-201ENST00000603134 700 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 LARP7P1-201ENST00000605576 316 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 AC121761.2-201ENST00000617300 689 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 AL607023.1-201ENST00000620045 248 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 MIR7843-201ENST00000622274 79 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.51□□□□□ -1.85
COL2A1P02458 AL356266.1-201ENST00000623311 483 ntBASIC3.51□□□□□ -1.85
COL2A1P02458 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.51□□□□□ -1.85
COL2A1P02458 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL2A1P02458 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.51□□□□□ -1.85
COL2A1P02458 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL2A1P02458 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL2A1P02458 AC009313.2-201ENST00000417893 1941 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL2A1P02458 RPL7P26-201ENST00000333817 754 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
COL2A1P02458 RNU6-920P-201ENST00000410926 92 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 AC105402.1-201ENST00000413336 545 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 AC003685.2-201ENST00000422795 395 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 AL049610.1-201ENST00000423374 372 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 PNRC2P1-201ENST00000423940 420 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 OR2AS1P-201ENST00000427827 319 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL2A1P02458 AC005189.1-201ENST00000431286 310 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.5□□□□□ -1.85
COL2A1P02458 USP9YP22-201ENST00000438971 294 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 AC010095.1-201ENST00000443543 144 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 AL589765.3-201ENST00000446084 462 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 AL109741.2-201ENST00000455561 343 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 AL136097.1-201ENST00000456945 913 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 AC128713.1-201ENST00000471495 306 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 AL024509.2-201ENST00000493462 493 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL2A1P02458 AC021146.7-201ENST00000509604 775 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL2A1P02458 LTV1P1-201ENST00000510683 1237 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
COL2A1P02458 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.5□□□□□ -1.85
COL2A1P02458 RNU6-1334P-201ENST00000516032 105 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.5□□□□□ -1.85
COL2A1P02458 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.5□□□□□ -1.85
COL2A1P02458 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.5□□□□□ -1.85
COL2A1P02458 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.5□□□□□ -1.85
COL2A1P02458 AC010198.2-201ENST00000550612 259 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.5□□□□□ -1.85
COL2A1P02458 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.5□□□□□ -1.85
COL2A1P02458 AC090695.1-201ENST00000561269 1222 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.5□□□□□ -1.85
COL2A1P02458 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.5□□□□□ -1.85
COL2A1P02458 ELOCP29-201ENST00000588193 334 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 AP000403.1-201ENST00000603349 851 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 SUMO2P14-201ENST00000604488 293 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 AL592295.2-201ENST00000612578 206 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 AC074140.1-201ENST00000621617 208 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL2A1P02458 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL2A1P02458 MTND5P24-201ENST00000438892 1767 ntBASIC3.5□□□□□ -1.85
COL2A1P02458 AC087359.1-201ENST00000508335 1740 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 CR848007.1-201ENST00000442354 1699 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 U3.11-201ENST00000364476 212 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 RNU6-157P-201ENST00000383957 107 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 RNU6-1200P-201ENST00000384162 107 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 HSPD1P16-201ENST00000402302 394 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 AC098592.2-201ENST00000413158 265 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.49□□□□□ -1.85
COL2A1P02458 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.49□□□□□ -1.85
COL2A1P02458 HMGN2P7-201ENST00000456186 273 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.49□□□□□ -1.85
COL2A1P02458 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.49□□□□□ -1.85
COL2A1P02458 AC004801.2-202ENST00000463559 283 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.49□□□□□ -1.85
COL2A1P02458 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.49□□□□□ -1.85
COL2A1P02458 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COL2A1P02458 AC114967.1-201ENST00000504890 259 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.49□□□□□ -1.85
COL2A1P02458 AP004247.1-201ENST00000531556 1289 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.49□□□□□ -1.85
COL2A1P02458 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.49□□□□□ -1.85
COL2A1P02458 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.49□□□□□ -1.85
COL2A1P02458 MTCO3P24-201ENST00000572729 782 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.49□□□□□ -1.85
COL2A1P02458 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.49□□□□□ -1.85
COL2A1P02458 AP002906.1-201ENST00000603405 233 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 DUXAP11-201ENST00000603858 526 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COL2A1P02458 AC128687.1-201ENST00000605304 619 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.49□□□□□ -1.85
COL2A1P02458 AL031775.1-201ENST00000607014 887 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 AC008498.1-201ENST00000613012 531 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.49□□□□□ -1.85
COL2A1P02458 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL2A1P02458 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
COL2A1P02458 SPATA2P1-201ENST00000431223 2055 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 U3.12-201ENST00000364498 214 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 RNU6-1283P-201ENST00000365314 105 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 RNU6-1320P-201ENST00000390838 107 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 SNORD65C-201ENST00000390962 71 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 RNU6-1269P-201ENST00000391139 107 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms