Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 USP9YP7-201ENST00000436723 430 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 RAD1P2-201ENST00000446414 663 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 USP9YP32-201ENST00000452432 430 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 LARP7P4-201ENST00000481075 878 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 AC007182.2-201ENST00000489251 402 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 RPS27P27-201ENST00000498779 255 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 AC025857.1-201ENST00000525252 377 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 TPMTP1-201ENST00000592307 737 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 RNU6-1320P-201ENST00000390838 107 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 RNU6-1269P-201ENST00000391139 107 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 TRAPPC2P10-201ENST00000415662 323 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 RNU6-599P-201ENST00000459383 107 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 RNU6-1193P-201ENST00000459461 107 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 AC098583.1-201ENST00000480875 255 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 MTND3P6-201ENST00000485242 339 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 NDUFB4P9-201ENST00000511646 388 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 RNU6-760P-201ENST00000516078 97 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 RNU6-491P-201ENST00000516099 110 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 OR4V1P-201ENST00000525394 1140 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 LRRC37A5P-203ENST00000580181 585 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 RNU6-368P-201ENST00000620928 107 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 RNU6-538P-201ENST00000622329 107 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 AL160394.1-201ENST00000624765 724 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 RNA5SP325-201ENST00000363756 130 ntBASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 RNU6-670P-201ENST00000364312 104 ntBASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 RNU6-1251P-201ENST00000364502 107 ntBASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 RNU4-7P-201ENST00000364758 141 ntBASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 RNU6-146P-201ENST00000384602 108 ntBASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 AC009237.2-201ENST00000421358 284 ntBASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 OR4K11P-201ENST00000431829 904 ntBASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 RPL36AP6-201ENST00000435770 321 ntBASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 BX322784.1-201ENST00000455793 1077 ntBASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 AC104629.2-201ENST00000468627 598 ntBASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 RPL21P18-201ENST00000469899 480 ntBASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 RPL23AP55-201ENST00000498163 452 ntBASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 OR8X1P-201ENST00000534542 869 ntBASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 AC245128.3-201ENST00000594721 748 ntBASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 Y_RNA.783-201ENST00000613546 102 ntBASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 API5P2-201ENST00000397055 1498 ntBASIC1.81□□□□□ -2.12
COL6A6A6NMZ7 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 RNU1-57P-201ENST00000384491 166 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AC240504.1-201ENST00000395709 845 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 SNORD88.1-201ENST00000408684 91 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 RNU6-564P-201ENST00000410983 104 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 MTND2P2-201ENST00000434633 945 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AL451074.3-201ENST00000437709 472 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 RNU1-123P-201ENST00000458950 160 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AC108120.2-201ENST00000512973 294 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AC110588.1-201ENST00000559699 137 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 RN7SL622P-201ENST00000585292 275 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AL590410.1-201ENST00000617925 333 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 RMST_5.1-201ENST00000618704 126 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AC092650.2-201ENST00000619984 902 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 SAR1AP4-201ENST00000429225 591 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 MTCYBP12-201ENST00000440559 1134 ntBASIC1.8□□□□□ -2.12
COL6A6A6NMZ7 FABP5P13-201ENST00000452144 328 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms