Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 HMGB1P27-201ENST00000431429 603 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CNOT1A5YKK6 YWHAZP7-201ENST00000436906 631 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.87□□□□□ -2.11
CNOT1A5YKK6 AL445669.2-201ENST00000454425 421 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 SNORD116-26-201ENST00000516006 96 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.87□□□□□ -2.11
CNOT1A5YKK6 MTCO3P13-201ENST00000577757 781 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 MIR3683-201ENST00000580847 82 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 AC068790.3-201ENST00000602988 553 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.87□□□□□ -2.11
CNOT1A5YKK6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CNOT1A5YKK6 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.87□□□□□ -2.11
CNOT1A5YKK6 WWP1P1-201ENST00000466609 2769 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 AC092326.2-201ENST00000624772 1561 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 AL391987.6-201ENST00000305671 199 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 AC013404.1-201ENST00000413068 249 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.87□□□□□ -2.11
CNOT1A5YKK6 MTCYBP31-201ENST00000438855 1122 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.87□□□□□ -2.11
CNOT1A5YKK6 AC104564.1-201ENST00000493028 407 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 TMEM248P1-201ENST00000510579 951 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 AC010265.1-201ENST00000513509 211 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.87□□□□□ -2.11
CNOT1A5YKK6 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.87□□□□□ -2.11
CNOT1A5YKK6 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.87□□□□□ -2.11
CNOT1A5YKK6 AC023043.3-201ENST00000593113 385 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 C2orf27A-204ENST00000623058 969 ntBASIC1.87□□□□□ -2.11
CNOT1A5YKK6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CNOT1A5YKK6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CNOT1A5YKK6 RBBP8P1-201ENST00000449447 1844 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.86□□□□□ -2.11
CNOT1A5YKK6 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.86□□□□□ -2.11
CNOT1A5YKK6 MTND2P29-201ENST00000438595 412 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 RPL36AP33-201ENST00000450395 310 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.86□□□□□ -2.11
CNOT1A5YKK6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.86□□□□□ -2.11
CNOT1A5YKK6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CNOT1A5YKK6 MTND5P27-201ENST00000428871 1720 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 AP001148.1-201ENST00000624124 2359 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CNOT1A5YKK6 Y_RNA.393-201ENST00000383936 102 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 RNU6-1320P-201ENST00000390838 107 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 RNU6-1269P-201ENST00000391139 107 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.86□□□□□ -2.11
CNOT1A5YKK6 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.86□□□□□ -2.11
CNOT1A5YKK6 RNU6-599P-201ENST00000459383 107 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 RNU6-1193P-201ENST00000459461 107 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 HAR1A.1-201ENST00000459583 118 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 ARL4AP2-201ENST00000507378 601 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.86□□□□□ -2.11
CNOT1A5YKK6 TTC39CP1-201ENST00000512513 755 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.86□□□□□ -2.11
CNOT1A5YKK6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.86□□□□□ -2.11
CNOT1A5YKK6 AL389895.1-201ENST00000554127 252 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 TPMTP1-201ENST00000592307 737 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 RNU6-368P-201ENST00000620928 107 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 RNU6-538P-201ENST00000622329 107 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 AF127577.6-201ENST00000623352 2191 ntBASIC1.86□□□□□ -2.11
CNOT1A5YKK6 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.86□□□□□ -2.11
CNOT1A5YKK6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 AC011155.1-201ENST00000316512 456 ntBASIC1.85□□□□□ -2.11
CNOT1A5YKK6 Y_RNA.68-201ENST00000362881 102 ntBASIC1.85□□□□□ -2.11
CNOT1A5YKK6 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 DEFA7P-201ENST00000382676 285 ntBASIC1.85□□□□□ -2.11
CNOT1A5YKK6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 NDUFB4P5-201ENST00000415445 361 ntBASIC1.85□□□□□ -2.11
CNOT1A5YKK6 AL590762.3-201ENST00000436372 640 ntBASIC1.85□□□□□ -2.11
CNOT1A5YKK6 AC003989.2-201ENST00000440224 169 ntBASIC1.85□□□□□ -2.11
CNOT1A5YKK6 MTAPP1-201ENST00000489154 819 ntBASIC1.85□□□□□ -2.11
CNOT1A5YKK6 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 AL353748.2-201ENST00000622148 471 ntBASIC1.85□□□□□ -2.11
CNOT1A5YKK6 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 RNU6-1027P-201ENST00000383998 107 ntBASIC1.85□□□□□ -2.11
CNOT1A5YKK6 AC008173.1-201ENST00000418901 264 ntBASIC1.85□□□□□ -2.11
CNOT1A5YKK6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 RPL23AP55-201ENST00000498163 452 ntBASIC1.85□□□□□ -2.11
CNOT1A5YKK6 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 Y_RNA.681-201ENST00000516445 113 ntBASIC1.85□□□□□ -2.11
CNOT1A5YKK6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.85□□□□□ -2.11
CNOT1A5YKK6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.84□□□□□ -2.11
CNOT1A5YKK6 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.84□□□□□ -2.11
CNOT1A5YKK6 AC110774.1-201ENST00000623567 2018 ntBASIC1.84□□□□□ -2.11
CNOT1A5YKK6 AC234782.4-201ENST00000417646 1048 ntBASIC1.84□□□□□ -2.11
CNOT1A5YKK6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.84□□□□□ -2.11
CNOT1A5YKK6 RPL36AP6-201ENST00000435770 321 ntBASIC1.84□□□□□ -2.11
CNOT1A5YKK6 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.84□□□□□ -2.11
CNOT1A5YKK6 AC022431.1-201ENST00000450941 438 ntBASIC1.84□□□□□ -2.11
CNOT1A5YKK6 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms