Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AP005205.1-201ENST00000563503 508 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AC090615.1-201ENST00000577519 154 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AC107952.2-201ENST00000606048 486 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AC092106.3-201ENST00000611308 722 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AC025588.4-201ENST00000615802 908 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AC079684.1-201ENST00000621405 437 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AP002782.1-201ENST00000623107 614 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 RPS4XP5-202ENST00000449995 1334 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 AP002907.1-201ENST00000606361 1430 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 RNU6-83P-201ENST00000384568 112 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 MIR128-1-201ENST00000384921 82 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 RPL22P18-201ENST00000417197 377 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 AL139421.1-201ENST00000423010 169 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 AL512649.1-201ENST00000428997 581 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 FGF7P5-201ENST00000441829 291 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 RPL26P28-201ENST00000451325 435 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 AC104308.1-201ENST00000454621 333 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 BTF3P5-201ENST00000457252 467 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 TMEM251P1-201ENST00000503717 318 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 RNY4P37-201ENST00000516225 96 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 AC023050.2-201ENST00000544968 387 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 MAGOH2P-202ENST00000584384 429 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 AC061975.8-201ENST00000587058 721 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 AC012493.2-201ENST00000595083 291 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 AC022146.1-201ENST00000595307 847 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 AP002826.1-201ENST00000608835 315 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 AC135507.2-201ENST00000612443 309 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 SNORA50A-202ENST00000629536 136 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 AL035425.3-201ENST00000564206 4996 ntBASIC3.48□□□□□ -1.85
PCDHGA1Q9Y5H4 ZNF876P-202ENST00000398732 1485 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 UBE3AP2-201ENST00000429033 2259 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 TAF9BP1-201ENST00000396646 746 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC005300.1-201ENST00000428401 373 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 RPL17P49-201ENST00000443728 411 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC098824.1-201ENST00000453565 980 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC091951.3-201ENST00000504093 246 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 VN1R104P-201ENST00000505115 1009 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC104090.1-201ENST00000506341 1171 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC021146.8-201ENST00000507455 733 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC006499.2-201ENST00000513470 337 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC010342.1-201ENST00000514047 877 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 ERHP1-201ENST00000523006 310 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 OR5AK1P-201ENST00000524837 922 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC009712.1-201ENST00000564938 316 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AL512347.1-201ENST00000566420 503 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 BNIP3P38-201ENST00000601117 544 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 DUXAP11-201ENST00000603858 526 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC025588.2-201ENST00000604851 466 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC012443.1-201ENST00000605605 231 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC013244.3-201ENST00000605614 388 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AL596245.1-201ENST00000618994 362 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AP003355.3-201ENST00000623465 114 ntBASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA1Q9Y5H4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms