Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 ZNF271P-202ENST00000465539 1970 ntBASIC1.99□□□□□ -2.09
HHLA3Q9XRX5 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
HHLA3Q9XRX5 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 GNG5P1-201ENST00000255500 204 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 RNU6-1074P-201ENST00000383995 104 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 RNU1-138P-201ENST00000384093 164 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 RPS20P25-201ENST00000412447 352 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AC092447.6-201ENST00000414578 210 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 RPL21P32-201ENST00000419877 477 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AL606495.1-201ENST00000422100 813 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 RPL31P54-201ENST00000429803 370 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AL513043.1-201ENST00000439124 535 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 RSL24D1P3-201ENST00000449255 495 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 snoU13.22-201ENST00000459428 104 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AC003982.1-202ENST00000469928 248 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AC011352.3-201ENST00000505162 593 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 RNA5SP402-201ENST00000517148 110 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AC087373.1-201ENST00000524920 491 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 OSBPL9P3-201ENST00000534523 595 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 NBEAP1-201ENST00000554452 979 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AL391156.1-201ENST00000554965 554 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 RPL23AP78-201ENST00000599928 470 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AC040174.2-201ENST00000602701 465 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AC024153.1-201ENST00000603103 365 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 DUXAP3-201ENST00000603616 594 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AC009220.3-201ENST00000604318 586 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AC008277.2-201ENST00000605196 797 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AC008083.4-201ENST00000615076 444 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 SNHG22-203ENST00000617833 660 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AL353748.2-201ENST00000622148 471 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AP006248.3-201ENST00000623580 594 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 AL049780.3-201ENST00000624612 1583 ntBASIC1.98□□□□□ -2.09
HHLA3Q9XRX5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 AC099654.7-201ENST00000635788 2127 ntBASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 NACA3P-201ENST00000359690 648 ntBASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 UBA52P6-201ENST00000399822 382 ntBASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 OR51A3P-201ENST00000413596 924 ntBASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 AL445183.3-201ENST00000414168 502 ntBASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 RPL23AP31-201ENST00000456160 467 ntBASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 VPS26AP1-201ENST00000483197 979 ntBASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 CBX3P3-201ENST00000508108 532 ntBASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 AC010625.1-201ENST00000511296 403 ntBASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 RPPH1-2P-201ENST00000516688 293 ntBASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 OR7K1P-201ENST00000546439 926 ntBASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 AC106900.2-201ENST00000604994 317 ntBASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 AC103798.2-201ENST00000624292 632 ntBASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 AP001002.2-201ENST00000625137 386 ntBASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.97□□□□□ -2.09
HHLA3Q9XRX5 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.96□□□□□ -2.1
HHLA3Q9XRX5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HHLA3Q9XRX5 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HHLA3Q9XRX5 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.96□□□□□ -2.1
HHLA3Q9XRX5 SNORA44-201ENST00000384584 132 ntBASIC1.96□□□□□ -2.1
HHLA3Q9XRX5 RNA5SP252-201ENST00000391131 119 ntBASIC1.96□□□□□ -2.1
HHLA3Q9XRX5 U3.29-201ENST00000391296 212 ntBASIC1.96□□□□□ -2.1
HHLA3Q9XRX5 ANAPC10P1-201ENST00000395991 556 ntBASIC1.96□□□□□ -2.1
HHLA3Q9XRX5 SNORA11.1-201ENST00000408133 129 ntBASIC1.96□□□□□ -2.1
HHLA3Q9XRX5 AL645937.1-202ENST00000421799 937 ntBASIC1.96□□□□□ -2.1
HHLA3Q9XRX5 HMGN2P30-201ENST00000423237 256 ntBASIC1.96□□□□□ -2.1
HHLA3Q9XRX5 AC012497.1-201ENST00000429392 575 ntBASIC1.96□□□□□ -2.1
HHLA3Q9XRX5 AC087499.2-201ENST00000432861 149 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms