Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 NANOGNBP1-201ENST00000448444 480 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 ELOCP23-201ENST00000452014 332 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AC074386.1-201ENST00000476560 767 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 RPL21P47-201ENST00000483696 477 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 RPL23AP49-201ENST00000492925 468 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 SUMO2P6-201ENST00000505273 288 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 XKRY-201ENST00000510392 1100 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 SCARNA17.1-201ENST00000516211 143 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 SCARNA17.2-201ENST00000516334 143 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AL161423.1-201ENST00000613700 262 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 SCARNA17.4-201ENST00000614296 143 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 SDR42E1P2-201ENST00000614861 481 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 SDR42E1P4-201ENST00000620894 481 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AC011330.2-201ENST00000621680 635 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 CR392039.5-201ENST00000623201 510 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AC073308.1-201ENST00000623696 305 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AC091932.3-201ENST00000624223 323 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AC106730.3-201ENST00000624568 641 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 MIR7515-201ENST00000637837 67 ntBASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.35□□□□□ -2.19
CDC42SE1Q9NRR8 AL049641.1-201ENST00000441055 1948 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC131280.1-202ENST00000624067 4211 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 MIR383-201ENST00000362257 73 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 RNU6-525P-201ENST00000363685 104 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 MIR676-201ENST00000390702 67 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 MIR1286-201ENST00000408112 78 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 SNORA3.3-201ENST00000408712 125 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 MIR1275-201ENST00000408770 80 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 RNA5SP80-201ENST00000410475 111 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC016397.1-201ENST00000412463 242 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AL136133.1-201ENST00000413694 376 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AL445183.3-201ENST00000414168 502 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 MEAF6P1-201ENST00000416092 327 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 ZNF90P2-204ENST00000419323 1075 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 RPL23AP38-201ENST00000423801 469 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 BRWD1P3-201ENST00000428816 390 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 TRIM60P13-201ENST00000432350 1283 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 USP12PX-201ENST00000432383 1057 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AL512844.2-201ENST00000433990 593 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 BNIP3P2-201ENST00000441221 577 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 RPS15AP29-201ENST00000445539 400 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 USP9YP34-201ENST00000453983 808 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 GTF2IP12-201ENST00000456547 356 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC116533.1-201ENST00000459748 321 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 COPS8P2-201ENST00000473228 627 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 LARP1BP2-201ENST00000486594 519 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 RPL21P13-201ENST00000488305 481 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 CEACAMP10-202ENST00000495431 496 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC022483.1-201ENST00000514020 567 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC011853.1-201ENST00000518911 454 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 OR8I1P-201ENST00000529291 931 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AL391261.3-201ENST00000557194 520 ntBASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.34□□□□□ -2.19
CDC42SE1Q9NRR8 RN7SL622P-201ENST00000585292 275 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms