Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RPS20P2-201ENST00000402520 389 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 RNU6-712P-201ENST00000410558 100 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AL137014.1-201ENST00000420490 1226 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 RPS11P1-201ENST00000451072 473 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 SNORD42A-201ENST00000459584 64 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AL139099.1-201ENST00000497398 403 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AC023632.4-201ENST00000517783 191 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AGGF1P4-201ENST00000568249 801 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AC060771.1-201ENST00000582031 164 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AC079089.3-201ENST00000603094 673 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AC138749.5-201ENST00000611461 208 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AC131902.3-201ENST00000611767 581 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AC116165.2-201ENST00000616705 206 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 AL392088.2-201ENST00000637607 285 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AC011460.1-201ENST00000636268 1834 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AL583834.1-201ENST00000406943 343 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 FCF1P10-201ENST00000407590 479 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 RNU2-16P-201ENST00000410712 136 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AL691449.1-201ENST00000426570 421 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AL358472.1-201ENST00000431295 329 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AC092641.1-201ENST00000440229 772 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 RPL21P89-201ENST00000444021 467 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 SNORD121B-201ENST00000458838 81 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 RPS26P15-201ENST00000488067 348 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AC017037.2-201ENST00000513850 890 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 MTCO2P32-201ENST00000514865 403 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AP003497.1-201ENST00000528472 562 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AC126177.3-201ENST00000551839 688 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AC007424.1-203ENST00000554613 687 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 GNRHR2P1-201ENST00000555315 631 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AC120057.2-201ENST00000571520 271 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AC137800.2-201ENST00000574375 120 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AC087683.1-201ENST00000591187 441 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AC092354.2-201ENST00000607786 514 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AC090425.2-201ENST00000608818 501 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 MIR6500-201ENST00000622700 86 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AC010149.2-201ENST00000637608 315 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 ZNF962P-201ENST00000443465 3140 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 IPO8P1-201ENST00000455509 3109 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 HSPA8P1-201ENST00000425843 1833 ntBASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHMP4CQ96CF2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 MTCO1P9-201ENST00000505577 1534 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 RNU6-1042P-201ENST00000384204 107 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 RNU6-114P-201ENST00000384704 105 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 SNORD115.1-201ENST00000391109 76 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 RPL7P25-201ENST00000404151 721 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 RNA5SP306-201ENST00000411087 107 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 FABP3P2-201ENST00000453169 399 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 ACTR3P3-201ENST00000480448 893 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 RPL23AP41-201ENST00000484754 458 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 LARP1BP2-201ENST00000486594 519 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 AC109464.2-201ENST00000510242 943 ntBASIC4.78□□□□□ -1.64
CHMP4CQ96CF2 MIR2114-201ENST00000516645 80 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms