Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 Y_RNA.554-201ENST00000384672 102 ntBASIC5.06□□□□□ -1.6
RTF1Q92541 MIR513A2-201ENST00000385249 127 ntBASIC5.06□□□□□ -1.6
RTF1Q92541 CIR1P3-201ENST00000405137 479 ntBASIC5.06□□□□□ -1.6
RTF1Q92541 NANOGP6-201ENST00000429190 847 ntBASIC5.06□□□□□ -1.6
RTF1Q92541 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.06□□□□□ -1.6
RTF1Q92541 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.06□□□□□ -1.6
RTF1Q92541 AC002381.1-201ENST00000447049 280 ntBASIC5.06□□□□□ -1.6
RTF1Q92541 GAPDHP17-201ENST00000449858 1001 ntBASIC5.06□□□□□ -1.6
RTF1Q92541 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.06□□□□□ -1.6
RTF1Q92541 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.06□□□□□ -1.6
RTF1Q92541 AC116353.2-201ENST00000505332 712 ntBASIC5.06□□□□□ -1.6
RTF1Q92541 AC108078.1-201ENST00000508073 725 ntBASIC5.06□□□□□ -1.6
RTF1Q92541 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.06□□□□□ -1.6
RTF1Q92541 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.06□□□□□ -1.6
RTF1Q92541 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.06□□□□□ -1.6
RTF1Q92541 AC074050.1-201ENST00000563247 211 ntBASIC5.06□□□□□ -1.6
RTF1Q92541 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.06□□□□□ -1.6
RTF1Q92541 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.06□□□□□ -1.6
RTF1Q92541 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.06□□□□□ -1.6
RTF1Q92541 RPL23AP92-201ENST00000603609 255 ntBASIC5.06□□□□□ -1.6
RTF1Q92541 AC091965.4-201ENST00000607691 587 ntBASIC5.06□□□□□ -1.6
RTF1Q92541 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RTF1Q92541 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.06□□□□□ -1.6
RTF1Q92541 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTF1Q92541 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTF1Q92541 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.06□□□□□ -1.6
RTF1Q92541 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RTF1Q92541 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RTF1Q92541 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.05□□□□□ -1.6
RTF1Q92541 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RTF1Q92541 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RTF1Q92541 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RTF1Q92541 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RTF1Q92541 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RTF1Q92541 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTF1Q92541 RHOT1P2-201ENST00000366423 333 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 RNU6-1226P-201ENST00000384317 107 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 MIR200C-201ENST00000384980 68 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 MIR93-201ENST00000385024 80 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RTF1Q92541 AC069218.2-201ENST00000411665 344 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 MTCO2P5-201ENST00000422621 426 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 RPS12P5-201ENST00000423449 371 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 AL591419.1-201ENST00000427423 339 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.05□□□□□ -1.6
RTF1Q92541 AC009961.2-201ENST00000435771 251 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.05□□□□□ -1.6
RTF1Q92541 AP000542.1-201ENST00000448473 371 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.05□□□□□ -1.6
RTF1Q92541 snoU13.7-201ENST00000459220 104 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 PABPC1P3-201ENST00000469174 459 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.05□□□□□ -1.6
RTF1Q92541 RNU6-718P-201ENST00000516166 105 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 SCARNA14-201ENST00000516903 136 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.05□□□□□ -1.6
RTF1Q92541 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.05□□□□□ -1.6
RTF1Q92541 TRMT10BP1-201ENST00000519377 943 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 AC022695.1-201ENST00000522089 237 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RTF1Q92541 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.05□□□□□ -1.6
RTF1Q92541 RPS3AP4-201ENST00000555161 764 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 AC018552.3-201ENST00000567416 561 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.05□□□□□ -1.6
RTF1Q92541 NRBF2P1-201ENST00000587407 859 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.05□□□□□ -1.6
RTF1Q92541 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.05□□□□□ -1.6
RTF1Q92541 BBIP1P1-201ENST00000602999 279 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 MIR92B-201ENST00000607575 96 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.05□□□□□ -1.6
RTF1Q92541 AL158209.2-201ENST00000619266 216 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.05□□□□□ -1.6
RTF1Q92541 PISRT1-201ENST00000626175 531 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 CYP3A51P-201ENST00000633513 256 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.05□□□□□ -1.6
RTF1Q92541 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTF1Q92541 AC007529.1-201ENST00000418574 2178 ntBASIC5.05□□□□□ -1.6
RTF1Q92541 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTF1Q92541 CCT4P2-201ENST00000233836 1548 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTF1Q92541 RNA5SP124-201ENST00000362739 110 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 Y_RNA.88-201ENST00000363029 99 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 RNU6-1243P-201ENST00000364028 107 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 Y_RNA.296-201ENST00000364930 108 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 MIR199A2-201ENST00000385289 110 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 MIR708-201ENST00000390708 88 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 RAB9AP3-201ENST00000412737 573 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 AC004552.1-201ENST00000419089 348 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTF1Q92541 AC000111.3-201ENST00000433478 193 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 GOT2P5-201ENST00000433995 546 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 AC105402.2-201ENST00000438503 358 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.04□□□□□ -1.6
RTF1Q92541 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.04□□□□□ -1.6
RTF1Q92541 RAB9AP1-201ENST00000449393 573 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.04□□□□□ -1.6
RTF1Q92541 AC104073.1-201ENST00000451988 151 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 NANOGP10-201ENST00000453325 895 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 AC099563.1-201ENST00000456086 418 ntBASIC5.04□□□□□ -1.6
RTF1Q92541 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.04□□□□□ -1.6
RTF1Q92541 RPL7P15-201ENST00000461190 712 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms