Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL662874.1-201ENST00000426065 230 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 EIF1P2-201ENST00000428233 350 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AP000936.3-201ENST00000438127 255 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AC127537.2-201ENST00000439258 465 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AC023141.9-201ENST00000458734 412 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AP000926.1-201ENST00000479573 241 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 SNORA31.6-201ENST00000516241 130 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 RNU6-347P-201ENST00000516658 105 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AC144568.1-201ENST00000520139 137 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AC034114.1-201ENST00000520293 285 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AC006023.2-201ENST00000609916 167 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 CDC27P2-201ENST00000425026 1922 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 RNU6-1243P-201ENST00000364028 107 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 RNA5SP242-201ENST00000364171 118 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 Y_RNA.277-201ENST00000364754 102 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 RNU6-1329P-201ENST00000365664 107 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 MIR215-201ENST00000384858 110 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 SNORA11B-201ENST00000408175 129 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 RPL21P24-201ENST00000413752 448 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 RPS12P5-201ENST00000423449 371 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 AC010733.1-201ENST00000451515 401 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 SNORA43.3-201ENST00000517240 103 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 AC100870.1-201ENST00000522035 505 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 AC104576.1-201ENST00000524225 88 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 IGBP1P1-201ENST00000554337 1009 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 AC007225.2-201ENST00000562529 256 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 AC009852.2-201ENST00000567898 485 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 AC010547.6-201ENST00000571789 193 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 BX284668.6-201ENST00000606899 438 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 MIR1244-1-201ENST00000612829 85 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 RN7SL787P-201ENST00000613000 284 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 MIR1244-3-201ENST00000635744 85 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 MIR1244-2-201ENST00000636449 85 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 MIR1244-4-202ENST00000636813 85 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 AL049767.1-202ENST00000637826 242 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 AC079776.5-201ENST00000641920 211 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 PWAR1-201ENST00000624188 2414 ntBASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LYSMD3Q7Z3D4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 RNU1-136P-201ENST00000384181 164 ntBASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 OR2AT2P-201ENST00000413438 905 ntBASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 AC016769.2-201ENST00000414815 475 ntBASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 RPL23AP25-201ENST00000430973 463 ntBASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 AL591704.1-201ENST00000432574 275 ntBASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 RPEP5-201ENST00000441137 268 ntBASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 EEF1B2P6-201ENST00000445713 673 ntBASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 RNU7-138P-201ENST00000459479 64 ntBASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 RPL7P49-201ENST00000471402 708 ntBASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms