Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 RNA5SP88-201ENST00000365560 109 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 RNU6-481P-201ENST00000384194 107 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 RAC1P3-201ENST00000416129 580 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 DEFB130D-201ENST00000426866 237 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.26□□□□□ -1.89
COL16A1Q07092 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.26□□□□□ -1.89
COL16A1Q07092 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.26□□□□□ -1.89
COL16A1Q07092 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.26□□□□□ -1.89
COL16A1Q07092 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.26□□□□□ -1.89
COL16A1Q07092 SUMO1P1-201ENST00000497904 306 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.26□□□□□ -1.89
COL16A1Q07092 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.26□□□□□ -1.89
COL16A1Q07092 FAM92A1P2-202ENST00000504766 877 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 OR10V3P-201ENST00000525712 725 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.26□□□□□ -1.89
COL16A1Q07092 AC007834.2-201ENST00000536310 343 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.26□□□□□ -1.89
COL16A1Q07092 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.26□□□□□ -1.89
COL16A1Q07092 AC008751.2-201ENST00000597885 980 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 AC131238.1-201ENST00000617135 328 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 U6.48-201ENST00000618523 106 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 MIR1291-201ENST00000627649 87 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL16A1Q07092 AC069528.2-201ENST00000624849 1991 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL16A1Q07092 RNU1-100P-201ENST00000365255 165 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL16A1Q07092 RN7SKP140-201ENST00000411196 284 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.26□□□□□ -1.89
COL16A1Q07092 TATDN1P1-201ENST00000414123 891 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 AL445183.3-201ENST00000414168 502 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.26□□□□□ -1.89
COL16A1Q07092 TXNL1P1-201ENST00000429528 554 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.26□□□□□ -1.89
COL16A1Q07092 AC011816.1-201ENST00000441346 546 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.26□□□□□ -1.89
COL16A1Q07092 OR10R1P-201ENST00000441524 1141 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 MTCO1P53-201ENST00000441633 699 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.26□□□□□ -1.89
COL16A1Q07092 RNU6-311P-201ENST00000516224 102 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 RNU6-295P-201ENST00000516901 104 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 AC245166.1-201ENST00000521012 253 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.26□□□□□ -1.89
COL16A1Q07092 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.26□□□□□ -1.89
COL16A1Q07092 HMGB3P26-201ENST00000560051 582 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.26□□□□□ -1.89
COL16A1Q07092 GAS5-AS1-201ENST00000602767 694 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 AC073387.2-201ENST00000604797 784 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.26□□□□□ -1.89
COL16A1Q07092 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.26□□□□□ -1.89
COL16A1Q07092 AP003399.1-201ENST00000637534 361 ntBASIC3.26□□□□□ -1.89
COL16A1Q07092 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.26□□□□□ -1.89
COL16A1Q07092 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
COL16A1Q07092 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
COL16A1Q07092 MTND5P31-201ENST00000419366 1374 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL16A1Q07092 CUL1P1-201ENST00000509510 2425 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL16A1Q07092 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL16A1Q07092 AC093775.1-201ENST00000624154 1868 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL16A1Q07092 RNU1-91P-201ENST00000364746 163 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 RNU6-906P-201ENST00000384700 70 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.25□□□□□ -1.89
COL16A1Q07092 RPL31P12-201ENST00000422587 358 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 VN1R42P-201ENST00000424651 344 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 USP9YP11-201ENST00000427537 717 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 AC093422.3-201ENST00000428506 305 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 FO393414.1-201ENST00000428697 1184 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 CR769776.1-201ENST00000441254 787 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL16A1Q07092 RN7SL442P-201ENST00000473804 320 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 AC134050.1-201ENST00000495088 933 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.25□□□□□ -1.89
COL16A1Q07092 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
COL16A1Q07092 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.25□□□□□ -1.89
COL16A1Q07092 VWA8P1-201ENST00000510889 176 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 AC133963.2-201ENST00000513686 578 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.25□□□□□ -1.89
COL16A1Q07092 RPS27AP18-201ENST00000515536 459 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 AF186190.1-201ENST00000517470 480 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.25□□□□□ -1.89
COL16A1Q07092 MTATP6P15-201ENST00000527233 835 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.25□□□□□ -1.89
COL16A1Q07092 AC010735.1-201ENST00000567305 1026 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 MTND3P13-201ENST00000574391 343 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.25□□□□□ -1.89
COL16A1Q07092 AC245036.5-201ENST00000596330 847 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.25□□□□□ -1.89
COL16A1Q07092 AC023813.4-201ENST00000607580 580 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 AC021755.4-201ENST00000616620 456 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.25□□□□□ -1.89
COL16A1Q07092 BX649567.1-201ENST00000642071 1134 ntBASIC3.25□□□□□ -1.89
COL16A1Q07092 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.25□□□□□ -1.89
COL16A1Q07092 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
COL16A1Q07092 MTND4P8-201ENST00000514997 1362 ntBASIC3.24□□□□□ -1.89
COL16A1Q07092 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.24□□□□□ -1.89
COL16A1Q07092 AC093010.3-201ENST00000570269 15214 ntBASIC3.24□□□□□ -1.89
COL16A1Q07092 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
COL16A1Q07092 HSPD1P16-201ENST00000402302 394 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms