Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.5□□□□□ -1.69
RHBDL3P58872 AC023161.2-201ENST00000551218 780 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 AC090877.1-201ENST00000561418 344 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 MIR3944-201ENST00000581277 108 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 MIR544B-201ENST00000582372 78 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.5□□□□□ -1.69
RHBDL3P58872 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.5□□□□□ -1.69
RHBDL3P58872 AL450472.3-201ENST00000615578 367 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 AP003485.2-201ENST00000623636 610 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 AC091965.5-201ENST00000624785 342 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 AC006927.3-201ENST00000638789 384 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDL3P58872 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDL3P58872 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RHBDL3P58872 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RHBDL3P58872 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RHBDL3P58872 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.49□□□□□ -1.69
RHBDL3P58872 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RHBDL3P58872 RNA5SP52-201ENST00000362448 134 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 SNORD46.1-201ENST00000364139 104 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
RHBDL3P58872 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RHBDL3P58872 RNU6-76P-201ENST00000384060 104 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 RNU6-769P-201ENST00000384407 104 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 RN7SKP53-201ENST00000411337 315 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 AL359704.1-201ENST00000411586 781 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 ATP5A1P2-201ENST00000412323 255 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.49□□□□□ -1.69
RHBDL3P58872 AL365203.2-201ENST00000423444 196 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 OR4K11P-201ENST00000431829 904 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 RPL7P34-201ENST00000433316 712 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDL3P58872 FAM103A2P-201ENST00000444122 354 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 OR6C5P-201ENST00000452388 923 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 AC007967.1-201ENST00000455422 1159 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.49□□□□□ -1.69
RHBDL3P58872 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDL3P58872 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.49□□□□□ -1.69
RHBDL3P58872 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDL3P58872 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDL3P58872 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.49□□□□□ -1.69
RHBDL3P58872 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.49□□□□□ -1.69
RHBDL3P58872 AC011468.4-201ENST00000603942 409 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.49□□□□□ -1.69
RHBDL3P58872 AL390240.1-201ENST00000612950 384 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 AL603755.1-201ENST00000619504 163 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 AC079248.2-201ENST00000623779 326 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 AC097520.1-201ENST00000624435 385 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 U6.98-201ENST00000637157 84 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RHBDL3P58872 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RHBDL3P58872 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RHBDL3P58872 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
RHBDL3P58872 AC006378.2-201ENST00000623178 2476 ntBASIC4.49□□□□□ -1.69
RHBDL3P58872 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RHBDL3P58872 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RHBDL3P58872 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDL3P58872 DDX10P1-201ENST00000448545 1933 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.48□□□□□ -1.69
RHBDL3P58872 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.48□□□□□ -1.69
RHBDL3P58872 UBE3AP2-201ENST00000429033 2259 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDL3P58872 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.48□□□□□ -1.69
RHBDL3P58872 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDL3P58872 RNA5SP387-201ENST00000364226 106 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 MIR183-201ENST00000384958 110 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 AL591034.1-201ENST00000407447 340 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 AMD1P2-201ENST00000412936 992 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.48□□□□□ -1.69
RHBDL3P58872 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.48□□□□□ -1.69
RHBDL3P58872 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.48□□□□□ -1.69
RHBDL3P58872 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.48□□□□□ -1.69
RHBDL3P58872 AL159169.1-201ENST00000421119 127 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 AC011233.1-201ENST00000422812 283 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 AL512649.1-201ENST00000428997 581 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 AC090774.1-201ENST00000435925 246 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 HSPD1P21-201ENST00000436541 245 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 SETD6P1-201ENST00000444575 317 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 BZW1P2-201ENST00000473537 826 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 AL049830.2-201ENST00000480072 201 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 RNU6-232P-201ENST00000517144 64 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 ERHP1-201ENST00000523006 310 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 PCMTD1P2-201ENST00000565017 355 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.48□□□□□ -1.69
RHBDL3P58872 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.48□□□□□ -1.69
RHBDL3P58872 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.48□□□□□ -1.69
RHBDL3P58872 AL353778.1-201ENST00000603149 408 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 AL357094.1-201ENST00000603845 844 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDL3P58872 AL139344.1-201ENST00000605228 195 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 AL034351.1-201ENST00000605288 668 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.48□□□□□ -1.69
RHBDL3P58872 AC008443.7-201ENST00000622195 246 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 AC243312.2-201ENST00000623340 601 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.48□□□□□ -1.69
RHBDL3P58872 ZNF962P-201ENST00000443465 3140 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RHBDL3P58872 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
RHBDL3P58872 AC138915.3-201ENST00000562908 1389 ntBASIC4.48□□□□□ -1.69
RHBDL3P58872 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms