Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VSX2P58304 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VSX2P58304 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
VSX2P58304 RNU6-839P-201ENST00000363347 108 ntBASIC2.75□□□□□ -1.97
VSX2P58304 RNU6-657P-201ENST00000383904 107 ntBASIC2.75□□□□□ -1.97
VSX2P58304 SNORA51.6-201ENST00000384151 125 ntBASIC2.75□□□□□ -1.97
VSX2P58304 Y_RNA.510-201ENST00000384511 114 ntBASIC2.75□□□□□ -1.97
VSX2P58304 SNORA40.4-201ENST00000390971 128 ntBASIC2.75□□□□□ -1.97
VSX2P58304 ARF4P3-201ENST00000397387 509 ntBASIC2.75□□□□□ -1.97
VSX2P58304 AL023807.1-201ENST00000407932 359 ntBASIC2.75□□□□□ -1.97
VSX2P58304 RNA5SP129-201ENST00000410276 118 ntBASIC2.75□□□□□ -1.97
VSX2P58304 YPEL5P1-201ENST00000419731 367 ntBASIC2.75□□□□□ -1.97
VSX2P58304 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.75□□□□□ -1.97
VSX2P58304 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.75□□□□□ -1.97
VSX2P58304 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.75□□□□□ -1.97
VSX2P58304 AC092634.2-201ENST00000428146 1010 ntBASIC2.75□□□□□ -1.97
VSX2P58304 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.75□□□□□ -1.97
VSX2P58304 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VSX2P58304 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.75□□□□□ -1.97
VSX2P58304 RPL23AP16-201ENST00000441715 421 ntBASIC2.75□□□□□ -1.97
VSX2P58304 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.75□□□□□ -1.97
VSX2P58304 RPL17P49-201ENST00000443728 411 ntBASIC2.75□□□□□ -1.97
VSX2P58304 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.75□□□□□ -1.97
VSX2P58304 NIPA2P5-201ENST00000452282 464 ntBASIC2.75□□□□□ -1.97
VSX2P58304 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.75□□□□□ -1.97
VSX2P58304 MTCO3P35-201ENST00000485582 781 ntBASIC2.75□□□□□ -1.97
VSX2P58304 AC092902.1-201ENST00000486999 259 ntBASIC2.75□□□□□ -1.97
VSX2P58304 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.75□□□□□ -1.97
VSX2P58304 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VSX2P58304 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
VSX2P58304 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.75□□□□□ -1.97
VSX2P58304 ARL4AP2-201ENST00000507378 601 ntBASIC2.75□□□□□ -1.97
VSX2P58304 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.75□□□□□ -1.97
VSX2P58304 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.75□□□□□ -1.97
VSX2P58304 OR4P1P-201ENST00000530808 1136 ntBASIC2.75□□□□□ -1.97
VSX2P58304 AP001317.1-201ENST00000531194 960 ntBASIC2.75□□□□□ -1.97
VSX2P58304 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.75□□□□□ -1.97
VSX2P58304 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.75□□□□□ -1.97
VSX2P58304 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.75□□□□□ -1.97
VSX2P58304 AC090502.2-201ENST00000549267 280 ntBASIC2.75□□□□□ -1.97
VSX2P58304 SETP2-201ENST00000553886 926 ntBASIC2.75□□□□□ -1.97
VSX2P58304 AC044913.1-201ENST00000557200 430 ntBASIC2.75□□□□□ -1.97
VSX2P58304 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.75□□□□□ -1.97
VSX2P58304 LARP7P2-201ENST00000575306 125 ntBASIC2.75□□□□□ -1.97
VSX2P58304 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.75□□□□□ -1.97
VSX2P58304 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.75□□□□□ -1.97
VSX2P58304 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.75□□□□□ -1.97
VSX2P58304 MIR7106-201ENST00000612419 65 ntBASIC2.75□□□□□ -1.97
VSX2P58304 MIR6852-201ENST00000621699 66 ntBASIC2.75□□□□□ -1.97
VSX2P58304 AC093875.1-201ENST00000623688 504 ntBASIC2.75□□□□□ -1.97
VSX2P58304 MIR6733-201ENST00000635723 61 ntBASIC2.75□□□□□ -1.97
VSX2P58304 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.75□□□□□ -1.97
VSX2P58304 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VSX2P58304 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VSX2P58304 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.75□□□□□ -1.97
VSX2P58304 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
VSX2P58304 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VSX2P58304 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.74□□□□□ -1.97
VSX2P58304 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
VSX2P58304 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VSX2P58304 DEFB109C-201ENST00000382575 264 ntBASIC2.74□□□□□ -1.97
VSX2P58304 DEFB109B-201ENST00000382656 264 ntBASIC2.74□□□□□ -1.97
VSX2P58304 SNORA18.3-201ENST00000384122 132 ntBASIC2.74□□□□□ -1.97
VSX2P58304 RNU6-1181P-201ENST00000384191 106 ntBASIC2.74□□□□□ -1.97
VSX2P58304 SNORA26.7-201ENST00000391288 122 ntBASIC2.74□□□□□ -1.97
VSX2P58304 U3.29-201ENST00000391296 212 ntBASIC2.74□□□□□ -1.97
VSX2P58304 RNU6-712P-201ENST00000410558 100 ntBASIC2.74□□□□□ -1.97
VSX2P58304 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.74□□□□□ -1.97
VSX2P58304 UBE2D3P2-201ENST00000424409 445 ntBASIC2.74□□□□□ -1.97
VSX2P58304 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.74□□□□□ -1.97
VSX2P58304 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.74□□□□□ -1.97
VSX2P58304 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.74□□□□□ -1.97
VSX2P58304 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.74□□□□□ -1.97
VSX2P58304 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.74□□□□□ -1.97
VSX2P58304 AL135938.1-201ENST00000443141 297 ntBASIC2.74□□□□□ -1.97
VSX2P58304 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VSX2P58304 HMGN1P5-201ENST00000448591 263 ntBASIC2.74□□□□□ -1.97
VSX2P58304 RPL36AP33-201ENST00000450395 310 ntBASIC2.74□□□□□ -1.97
VSX2P58304 MRPL42P4-201ENST00000453267 443 ntBASIC2.74□□□□□ -1.97
VSX2P58304 AL590639.1-201ENST00000456484 337 ntBASIC2.74□□□□□ -1.97
VSX2P58304 TRBV26-201ENST00000456572 344 ntBASIC2.74□□□□□ -1.97
VSX2P58304 RPL21P41-201ENST00000459863 264 ntBASIC2.74□□□□□ -1.97
VSX2P58304 AC010301.1-201ENST00000473936 355 ntBASIC2.74□□□□□ -1.97
VSX2P58304 AP004217.1-201ENST00000480579 346 ntBASIC2.74□□□□□ -1.97
VSX2P58304 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.74□□□□□ -1.97
VSX2P58304 DYNLL1P6-201ENST00000503440 264 ntBASIC2.74□□□□□ -1.97
VSX2P58304 KLHL2P1-201ENST00000508691 521 ntBASIC2.74□□□□□ -1.97
VSX2P58304 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VSX2P58304 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.74□□□□□ -1.97
VSX2P58304 MTCO2P32-201ENST00000514865 403 ntBASIC2.74□□□□□ -1.97
VSX2P58304 RNA5SP76-201ENST00000516277 87 ntBASIC2.74□□□□□ -1.97
VSX2P58304 snoZ278.1-201ENST00000517059 112 ntBASIC2.74□□□□□ -1.97
VSX2P58304 AC023632.1-201ENST00000518463 375 ntBASIC2.74□□□□□ -1.97
VSX2P58304 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.74□□□□□ -1.97
VSX2P58304 AC019227.1-201ENST00000526902 510 ntBASIC2.74□□□□□ -1.97
VSX2P58304 ZNF705CP-201ENST00000530515 889 ntBASIC2.74□□□□□ -1.97
VSX2P58304 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
VSX2P58304 MIR4666A-201ENST00000580160 79 ntBASIC2.74□□□□□ -1.97
VSX2P58304 AC006116.7-201ENST00000590141 756 ntBASIC2.74□□□□□ -1.97
VSX2P58304 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms