Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 MIR3609-201ENST00000582661 80 ntBASIC3.55□□□□□ -1.84
CTNNA1P35221 AC093227.2-201ENST00000589357 285 ntBASIC3.55□□□□□ -1.84
CTNNA1P35221 GLUD1P4-201ENST00000590914 418 ntBASIC3.55□□□□□ -1.84
CTNNA1P35221 AL121652.1-201ENST00000608851 448 ntBASIC3.55□□□□□ -1.84
CTNNA1P35221 MIR7851-201ENST00000610611 160 ntBASIC3.55□□□□□ -1.84
CTNNA1P35221 MIR6810-201ENST00000622701 70 ntBASIC3.55□□□□□ -1.84
CTNNA1P35221 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.55□□□□□ -1.84
CTNNA1P35221 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTNNA1P35221 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTNNA1P35221 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CTNNA1P35221 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.54□□□□□ -1.84
CTNNA1P35221 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CTNNA1P35221 MIR148B-201ENST00000362252 99 ntBASIC3.54□□□□□ -1.84
CTNNA1P35221 RNU6-343P-201ENST00000364709 104 ntBASIC3.54□□□□□ -1.84
CTNNA1P35221 RNU6-952P-201ENST00000391164 108 ntBASIC3.54□□□□□ -1.84
CTNNA1P35221 RAB28P1-201ENST00000411517 641 ntBASIC3.54□□□□□ -1.84
CTNNA1P35221 RPS3AP37-201ENST00000419176 745 ntBASIC3.54□□□□□ -1.84
CTNNA1P35221 AC234781.2-201ENST00000426370 994 ntBASIC3.54□□□□□ -1.84
CTNNA1P35221 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.54□□□□□ -1.84
CTNNA1P35221 SNRPGP6-201ENST00000451124 220 ntBASIC3.54□□□□□ -1.84
CTNNA1P35221 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.54□□□□□ -1.84
CTNNA1P35221 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.54□□□□□ -1.84
CTNNA1P35221 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.54□□□□□ -1.84
CTNNA1P35221 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.54□□□□□ -1.84
CTNNA1P35221 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.54□□□□□ -1.84
CTNNA1P35221 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.54□□□□□ -1.84
CTNNA1P35221 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.54□□□□□ -1.84
CTNNA1P35221 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.54□□□□□ -1.84
CTNNA1P35221 DEFB131D-201ENST00000526803 184 ntBASIC3.54□□□□□ -1.84
CTNNA1P35221 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.54□□□□□ -1.84
CTNNA1P35221 MTCYBP23-201ENST00000558717 1102 ntBASIC3.54□□□□□ -1.84
CTNNA1P35221 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.54□□□□□ -1.84
CTNNA1P35221 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.54□□□□□ -1.84
CTNNA1P35221 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.54□□□□□ -1.84
CTNNA1P35221 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.54□□□□□ -1.84
CTNNA1P35221 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.54□□□□□ -1.84
CTNNA1P35221 AC006557.5-201ENST00000603126 811 ntBASIC3.54□□□□□ -1.84
CTNNA1P35221 AC119501.1-201ENST00000603646 475 ntBASIC3.54□□□□□ -1.84
CTNNA1P35221 AC004067.1-201ENST00000608733 700 ntBASIC3.54□□□□□ -1.84
CTNNA1P35221 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.54□□□□□ -1.84
CTNNA1P35221 AC006213.4-201ENST00000616184 634 ntBASIC3.54□□□□□ -1.84
CTNNA1P35221 AC002550.2-201ENST00000621246 394 ntBASIC3.54□□□□□ -1.84
CTNNA1P35221 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.54□□□□□ -1.84
CTNNA1P35221 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTNNA1P35221 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CTNNA1P35221 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTNNA1P35221 GABRG2-229ENST00000641017 3628 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 SRP72P2-201ENST00000344851 1979 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CTNNA1P35221 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CTNNA1P35221 RNA5SP197-201ENST00000363357 119 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 RN7SKP227-201ENST00000364445 330 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.53□□□□□ -1.84
CTNNA1P35221 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CTNNA1P35221 RPL23AP29-201ENST00000397284 453 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.53□□□□□ -1.84
CTNNA1P35221 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.53□□□□□ -1.84
CTNNA1P35221 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.53□□□□□ -1.84
CTNNA1P35221 AL590383.1-201ENST00000428602 75 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 AC090774.1-201ENST00000435925 246 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 HMGB3P11-201ENST00000440127 604 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 AC002381.1-201ENST00000447049 280 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.53□□□□□ -1.84
CTNNA1P35221 RBMY2UP-201ENST00000453474 324 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.53□□□□□ -1.84
CTNNA1P35221 snoU109.3-201ENST00000459477 145 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 RPL31P50-201ENST00000471002 296 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 AC103987.1-201ENST00000473394 348 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 HSPE1P6-201ENST00000479457 291 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 GMPSP1-201ENST00000514075 579 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 RNU6-150P-201ENST00000516237 95 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 RNU6-714P-201ENST00000516963 103 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTNNA1P35221 AC103843.2-201ENST00000530523 682 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 AC005476.1-201ENST00000554427 397 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 CYCSP2-201ENST00000558168 301 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 NUTF2P8-201ENST00000604593 363 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 AL158211.4-201ENST00000606988 584 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 AC073476.4-201ENST00000628409 72 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 AC127502.3-201ENST00000636170 1206 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 AC091564.4-201ENST00000533934 2194 ntBASIC3.53□□□□□ -1.84
CTNNA1P35221 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.53□□□□□ -1.85
CTNNA1P35221 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.52□□□□□ -1.85
CTNNA1P35221 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTNNA1P35221 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTNNA1P35221 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTNNA1P35221 U3.11-201ENST00000364476 212 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 Y_RNA.311-201ENST00000365068 96 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.52□□□□□ -1.85
CTNNA1P35221 AL136310.1-201ENST00000404926 654 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.52□□□□□ -1.85
CTNNA1P35221 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTNNA1P35221 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CTNNA1P35221 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.52□□□□□ -1.85
CTNNA1P35221 AL356867.1-201ENST00000429623 299 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 AL445584.1-201ENST00000431451 330 ntBASIC3.52□□□□□ -1.85
CTNNA1P35221 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.52□□□□□ -1.85
CTNNA1P35221 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.52□□□□□ -1.85
CTNNA1P35221 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.52□□□□□ -1.85
CTNNA1P35221 ZNF886P-201ENST00000450781 723 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms