Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC104308.1-201ENST00000454621 333 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 AC005008.1-201ENST00000456151 612 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 AC022364.2-201ENST00000457963 554 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC6A4P31645 RPL7P19-201ENST00000469948 618 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 AC055855.1-201ENST00000489563 579 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 DEFB109F-201ENST00000491870 277 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 AC104164.2-201ENST00000496953 495 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC6A4P31645 AL592156.1-201ENST00000508758 304 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC6A4P31645 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC6A4P31645 RNU6-358P-201ENST00000516564 75 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 MIR2116-201ENST00000517221 80 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC6A4P31645 AC006064.5-201ENST00000541782 248 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC6A4P31645 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC6A4P31645 RPL21P7-201ENST00000557463 483 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 MIR3146-201ENST00000580367 79 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC6A4P31645 AC060771.1-201ENST00000582031 164 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 YWHAQP7-201ENST00000603536 658 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 AC011451.2-201ENST00000604303 598 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 MIR8059-201ENST00000620427 81 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 AC005609.4-201ENST00000625071 447 ntBASIC4.39□□□□□ -1.71
SLC6A4P31645 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SLC6A4P31645 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC6A4P31645 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC6A4P31645 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC6A4P31645 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC6A4P31645 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC6A4P31645 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC6A4P31645 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC6A4P31645 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SLC6A4P31645 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC6A4P31645 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC6A4P31645 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
SLC6A4P31645 SNORA72.1-201ENST00000363485 129 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 RNA5SP515-201ENST00000364570 118 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 RNU6-282P-201ENST00000365357 103 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 RNU1-64P-201ENST00000365443 163 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SLC6A4P31645 SNORD51-201ENST00000384320 80 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 SNORA70C-201ENST00000384538 135 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 MIR23B-201ENST00000384832 97 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 RNU6-780P-201ENST00000391030 104 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 RNA5SP146-201ENST00000410743 123 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC6A4P31645 AC138393.2-201ENST00000414742 246 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 MTATP6P18-201ENST00000417994 673 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC6A4P31645 EIF1P3-201ENST00000423841 334 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC6A4P31645 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC6A4P31645 PSMA2P3-201ENST00000429685 675 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.38□□□□□ -1.71
SLC6A4P31645 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC6A4P31645 SNORD121B-201ENST00000458838 81 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AL139099.1-201ENST00000497398 403 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AC117522.1-201ENST00000509821 380 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AC026402.1-201ENST00000513642 170 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 Y_RNA.702-201ENST00000516843 96 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AC107934.1-201ENST00000522215 217 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC6A4P31645 MTND1P35-201ENST00000526739 508 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AP001646.1-201ENST00000527936 915 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AP003497.1-201ENST00000528472 562 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.38□□□□□ -1.71
SLC6A4P31645 AC022882.1-201ENST00000532142 501 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SLC6A4P31645 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC6A4P31645 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC6A4P31645 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC6A4P31645 MIR3167-201ENST00000579623 85 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC6A4P31645 VN1R85P-201ENST00000601587 426 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 KC877982.1-201ENST00000602313 470 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AL162413.1-201ENST00000603198 110 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 OR6R2P-201ENST00000609216 300 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AL138721.1-201ENST00000616756 179 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SLC6A4P31645 AC012150.2-201ENST00000621300 544 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AP003122.6-201ENST00000623831 495 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AC034229.5-201ENST00000624258 185 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 AC009161.2-201ENST00000624626 138 ntBASIC4.38□□□□□ -1.71
SLC6A4P31645 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC6A4P31645 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
SLC6A4P31645 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SLC6A4P31645 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC6A4P31645 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC6A4P31645 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC6A4P31645 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SLC6A4P31645 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC6A4P31645 AC027290.2-201ENST00000623210 18662 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 FAM91A3P-201ENST00000456826 2544 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC6A4P31645 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SLC6A4P31645 RNU6-1097P-201ENST00000363586 107 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms