Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 MIR320C1-201ENST00000408566 88 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 RPS15AP38-201ENST00000413110 372 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA13P31271 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA13P31271 AC092447.6-201ENST00000414578 210 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA13P31271 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA13P31271 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA13P31271 AL035407.1-201ENST00000429211 571 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 VN1R108P-201ENST00000431580 830 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA13P31271 SDCBPP1-201ENST00000440192 890 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 RPS3AP12-201ENST00000443616 753 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA13P31271 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA13P31271 MTCO3P16-201ENST00000454456 754 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 ARPC3P2-201ENST00000457786 533 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 AP000873.1-201ENST00000463987 400 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 ST13P14-201ENST00000474095 734 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 RPL21P13-201ENST00000488305 481 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 AC021678.1-201ENST00000505195 936 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 COX7A2P2-201ENST00000505291 250 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.87□□□□□ -1.79
HOXA13P31271 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA13P31271 MTCO3P28-201ENST00000513351 515 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 MTND5P4-201ENST00000514978 288 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 SNORA70.24-201ENST00000517233 118 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA13P31271 OR6C7P-201ENST00000547875 934 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA13P31271 AC126177.3-201ENST00000551839 688 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 AC005476.1-201ENST00000554427 397 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA13P31271 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA13P31271 MIR3200-201ENST00000580767 85 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
HOXA13P31271 AC020914.4-201ENST00000597690 277 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 AC006557.5-201ENST00000603126 811 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXA13P31271 AC106791.2-201ENST00000604680 391 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXA13P31271 uc_338.32-201ENST00000615087 172 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 MIR7112-201ENST00000616126 65 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 AL359715.5-201ENST00000623431 443 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXA13P31271 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXA13P31271 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXA13P31271 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA13P31271 AC097714.1-201ENST00000511272 1647 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 AC008725.1-201ENST00000605123 2263 ntBASIC3.87□□□□□ -1.79
HOXA13P31271 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXA13P31271 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA13P31271 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXA13P31271 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXA13P31271 CYCSP45-201ENST00000402289 315 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 AL356131.1-201ENST00000405826 414 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 RN7SKP111-201ENST00000410349 271 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 AL593851.1-201ENST00000426171 157 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 MUPP-201ENST00000438111 566 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 AL445567.1-201ENST00000439121 144 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 AL357552.1-201ENST00000445254 415 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 RPS29P31-201ENST00000446147 164 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 AC002381.1-201ENST00000447049 280 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA13P31271 AP001992.1-205ENST00000462248 379 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 AC072039.1-201ENST00000477611 581 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 RPL32P34-201ENST00000486380 400 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 FCF1P3-201ENST00000496394 590 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXA13P31271 Y_RNA.688-201ENST00000516565 95 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.86□□□□□ -1.79
HOXA13P31271 CBX3P5-201ENST00000552017 521 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXA13P31271 AC008015.1-201ENST00000555505 465 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.86□□□□□ -1.79
HOXA13P31271 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXA13P31271 AC012435.1-202ENST00000568772 240 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 ISCA1P3-201ENST00000577104 373 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 MIR4738-201ENST00000579134 87 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXA13P31271 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXA13P31271 AC010928.3-201ENST00000587712 541 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.86□□□□□ -1.79
HOXA13P31271 AC010620.1-201ENST00000601088 1102 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 AC146944.4-201ENST00000602697 718 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXA13P31271 AC018638.7-201ENST00000605836 1114 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 AL390208.1-201ENST00000605885 644 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA13P31271 MIR3651-201ENST00000630427 90 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 MIR3974-201ENST00000637126 96 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA13P31271 AC087359.1-201ENST00000508335 1740 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 CEP170P1-201ENST00000502249 4587 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 AL513302.2-201ENST00000562313 1842 ntBASIC3.86□□□□□ -1.79
HOXA13P31271 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXA13P31271 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXA13P31271 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXA13P31271 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXA13P31271 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms