Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC087499.2-201ENST00000432861 149 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC009961.3-201ENST00000449832 765 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 RPL23AP31-201ENST00000456160 467 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 SETP11-201ENST00000473027 690 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 RPL30P14-201ENST00000482744 348 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 MTND3P24-201ENST00000506306 329 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 RNU6-551P-201ENST00000516661 103 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 COX6CP8-201ENST00000522620 226 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC126177.3-201ENST00000551839 688 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 GLUD1P4-201ENST00000590914 418 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 NUTF2P8-201ENST00000604593 363 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 AL355802.4-201ENST00000607635 548 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC010297.1-201ENST00000623948 149 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 FO624990.1-201ENST00000636373 85 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC109315.1-201ENST00000584143 1347 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC025263.3-201ENST00000622965 1396 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC096644.4-201ENST00000563417 2912 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC011460.1-201ENST00000636268 1834 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC130650.2-201ENST00000618736 2403 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DMBP28068 OR5J1P-201ENST00000313544 939 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 RNA5SP393-201ENST00000363423 117 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DMBP28068 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
HLA-DMBP28068 RNU1-138P-201ENST00000384093 164 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 Y_RNA.510-201ENST00000384511 114 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 RNA5SP210-201ENST00000391034 120 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 FAT1P1-201ENST00000406588 507 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DMBP28068 RPS15AP38-201ENST00000413110 372 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.05□□□□□ -2.08
HLA-DMBP28068 ARL2BPP3-201ENST00000421226 480 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 PTP4A1P3-201ENST00000433661 420 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC112220.1-201ENST00000434628 355 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC105272.1-201ENST00000438604 198 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC005002.1-201ENST00000447458 540 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 MTND2P19-201ENST00000449129 1012 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC093663.2-201ENST00000484625 313 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DMBP28068 VN1R104P-201ENST00000505115 1009 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DMBP28068 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.05□□□□□ -2.08
HLA-DMBP28068 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 PRELID3BP4-201ENST00000515476 571 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DMBP28068 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.05□□□□□ -2.08
HLA-DMBP28068 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC025918.2-201ENST00000558683 763 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DMBP28068 AP005205.1-201ENST00000563503 508 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DMBP28068 AL356575.1-201ENST00000603008 283 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AL049779.4-201ENST00000604500 156 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC019159.1-201ENST00000605094 187 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AL133507.1-201ENST00000605269 557 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC006329.2-201ENST00000611491 394 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC008083.4-201ENST00000615076 444 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC140725.3-201ENST00000616193 880 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AL353748.2-201ENST00000622148 471 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AC002064.3-201ENST00000623448 346 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 CR381653.2-201ENST00000624041 768 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 AL590396.2-201ENST00000636511 1041 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DMBP28068 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.05□□□□□ -2.08
HLA-DMBP28068 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DMBP28068 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
HLA-DMBP28068 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DMBP28068 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DMBP28068 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DMBP28068 AL355596.1-201ENST00000565399 3996 ntBASIC2.04□□□□□ -2.08
HLA-DMBP28068 RNU1-112P-201ENST00000364401 164 ntBASIC2.04□□□□□ -2.08
HLA-DMBP28068 RNU6-1074P-201ENST00000383995 104 ntBASIC2.04□□□□□ -2.08
HLA-DMBP28068 Y_RNA.500-201ENST00000384466 111 ntBASIC2.04□□□□□ -2.08
HLA-DMBP28068 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
HLA-DMBP28068 CYCSP45-201ENST00000402289 315 ntBASIC2.04□□□□□ -2.08
HLA-DMBP28068 UBE2V1P11-201ENST00000411559 285 ntBASIC2.04□□□□□ -2.08
HLA-DMBP28068 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DMBP28068 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms