Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC135776.4-201ENST00000624300 1904 ntBASIC2.46□□□□□ -2.02
HLA-DMAP28067 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DMAP28067 ZNF849P-201ENST00000594711 1566 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DMAP28067 NACA3P-201ENST00000359690 648 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC234772.1-201ENST00000377927 937 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 RNU6-354P-201ENST00000383862 107 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 RNU6-610P-201ENST00000384264 107 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 RNU6-932P-201ENST00000391108 106 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 TAF9BP1-201ENST00000396646 746 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 AL512633.1-201ENST00000399931 655 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 RNU6-575P-201ENST00000411326 105 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 RPL7P8-201ENST00000411964 730 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC245052.5-201ENST00000416320 649 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 TAF13P2-201ENST00000416876 286 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC092427.1-202ENST00000430569 476 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 HMGN2P31-201ENST00000432430 273 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC007389.2-201ENST00000434630 306 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 RPL23AP74-201ENST00000437246 471 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 RNF2P1-201ENST00000442955 1010 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 OR51B8P-201ENST00000449892 769 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC109925.1-201ENST00000478069 331 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC010625.1-201ENST00000511296 403 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC092593.2-201ENST00000513866 913 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 RNA5SP402-201ENST00000517148 110 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 SNORA31.21-201ENST00000517180 77 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC026403.1-201ENST00000518938 295 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 NCAPGP2-201ENST00000557911 754 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC006130.2-201ENST00000586202 326 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC015871.2-201ENST00000603605 948 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 AP002826.1-201ENST00000608835 315 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 AP005229.2-201ENST00000609980 697 ntBASIC2.45□□□□□ -2.02
HLA-DMAP28067 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DMAP28067 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DMAP28067 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DMAP28067 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DMAP28067 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DMAP28067 RNU1-33P-201ENST00000364249 162 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 RNA5SP515-201ENST00000364570 118 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 RNU6-619P-201ENST00000365146 108 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 MIR554-201ENST00000384874 96 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 MCTS2P-201ENST00000394552 546 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 MTND4LP10-201ENST00000435146 291 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 AC000041.1-201ENST00000439655 175 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 MOB1AP2-201ENST00000446060 614 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 AL589880.1-201ENST00000448271 287 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 AC073901.1-201ENST00000462471 408 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 AC008379.1-201ENST00000463655 464 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 AP000852.1-201ENST00000472460 573 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 RN7SL293P-201ENST00000481765 281 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 RNU6-1095P-201ENST00000516148 108 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 SNORA70.16-201ENST00000516390 95 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 RNU1-45P-201ENST00000517191 141 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 AC113192.3-201ENST00000529152 742 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 AC006518.2-201ENST00000542513 940 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 AC011260.1-201ENST00000578420 472 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 RPL12P50-201ENST00000603116 116 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 AL049779.4-201ENST00000604500 156 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 AC012443.1-201ENST00000605605 231 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DMAP28067 AL158211.2-201ENST00000607282 395 ntBASIC2.44□□□□□ -2.02
HLA-DMAP28067 CR392039.5-201ENST00000623201 510 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms