Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LDLRP01130 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.72□□□□□ -1.81
LDLRP01130 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
LDLRP01130 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.72□□□□□ -1.81
LDLRP01130 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.72□□□□□ -1.81
LDLRP01130 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.72□□□□□ -1.81
LDLRP01130 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.72□□□□□ -1.81
LDLRP01130 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
LDLRP01130 HSPE1P3-201ENST00000559254 309 ntBASIC3.72□□□□□ -1.81
LDLRP01130 AC011260.1-201ENST00000578420 472 ntBASIC3.72□□□□□ -1.81
LDLRP01130 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.72□□□□□ -1.81
LDLRP01130 AC073544.2-201ENST00000601155 540 ntBASIC3.72□□□□□ -1.81
LDLRP01130 BNIP3P30-201ENST00000601184 574 ntBASIC3.72□□□□□ -1.81
LDLRP01130 AL596327.1-201ENST00000603629 213 ntBASIC3.72□□□□□ -1.81
LDLRP01130 AL139286.2-201ENST00000606838 396 ntBASIC3.72□□□□□ -1.81
LDLRP01130 AF246928.1-201ENST00000623768 87 ntBASIC3.72□□□□□ -1.81
LDLRP01130 AL356596.1-201ENST00000624230 379 ntBASIC3.72□□□□□ -1.81
LDLRP01130 AC091905.1-201ENST00000624400 311 ntBASIC3.72□□□□□ -1.81
LDLRP01130 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.72□□□□□ -1.81
LDLRP01130 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
LDLRP01130 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.72□□□□□ -1.81
LDLRP01130 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.72□□□□□ -1.81
LDLRP01130 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
LDLRP01130 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
LDLRP01130 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
LDLRP01130 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDLRP01130 ZNF734P-201ENST00000419494 1534 ntBASIC3.71□□□□□ -1.82
LDLRP01130 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
LDLRP01130 AC027514.1-201ENST00000588561 1603 ntBASIC3.71□□□□□ -1.82
LDLRP01130 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LDLRP01130 RPL21P132-201ENST00000331267 462 ntBASIC3.71□□□□□ -1.82
LDLRP01130 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
LDLRP01130 SNORA60-201ENST00000362396 134 ntBASIC3.71□□□□□ -1.82
LDLRP01130 Y_RNA.18-201ENST00000362461 102 ntBASIC3.71□□□□□ -1.82
LDLRP01130 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LDLRP01130 MIR634-201ENST00000385208 97 ntBASIC3.71□□□□□ -1.82
LDLRP01130 PTMAP5-201ENST00000393073 333 ntBASIC3.71□□□□□ -1.82
LDLRP01130 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDLRP01130 RNU2-37P-201ENST00000410695 177 ntBASIC3.71□□□□□ -1.82
LDLRP01130 RPL7AP73-201ENST00000413490 353 ntBASIC3.71□□□□□ -1.82
LDLRP01130 AC068533.1-201ENST00000418542 415 ntBASIC3.71□□□□□ -1.82
LDLRP01130 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.71□□□□□ -1.82
LDLRP01130 RPL7P30-201ENST00000420888 709 ntBASIC3.71□□□□□ -1.82
LDLRP01130 RPL21P109-201ENST00000422213 475 ntBASIC3.71□□□□□ -1.82
LDLRP01130 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.71□□□□□ -1.82
LDLRP01130 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.71□□□□□ -1.82
LDLRP01130 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.71□□□□□ -1.82
LDLRP01130 PDSS1P2-201ENST00000449397 678 ntBASIC3.71□□□□□ -1.82
LDLRP01130 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.71□□□□□ -1.82
LDLRP01130 AC005297.2-201ENST00000450430 606 ntBASIC3.71□□□□□ -1.82
LDLRP01130 RNU7-136P-201ENST00000458819 69 ntBASIC3.71□□□□□ -1.82
LDLRP01130 AC068724.1-201ENST00000487100 792 ntBASIC3.71□□□□□ -1.82
LDLRP01130 AL139099.1-201ENST00000497398 403 ntBASIC3.71□□□□□ -1.82
LDLRP01130 AC026427.2-201ENST00000506228 536 ntBASIC3.71□□□□□ -1.82
LDLRP01130 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.71□□□□□ -1.82
LDLRP01130 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.71□□□□□ -1.82
LDLRP01130 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.71□□□□□ -1.82
LDLRP01130 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.71□□□□□ -1.82
LDLRP01130 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.71□□□□□ -1.82
LDLRP01130 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.71□□□□□ -1.82
LDLRP01130 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.71□□□□□ -1.82
LDLRP01130 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.71□□□□□ -1.82
LDLRP01130 AC006362.1-201ENST00000567392 174 ntBASIC3.71□□□□□ -1.82
LDLRP01130 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.71□□□□□ -1.82
LDLRP01130 AC020914.6-201ENST00000594327 272 ntBASIC3.71□□□□□ -1.82
LDLRP01130 DUXAP11-201ENST00000603858 526 ntBASIC3.71□□□□□ -1.82
LDLRP01130 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.71□□□□□ -1.82
LDLRP01130 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.71□□□□□ -1.82
LDLRP01130 AC103710.3-201ENST00000608157 948 ntBASIC3.71□□□□□ -1.82
LDLRP01130 AC024560.3-201ENST00000608482 349 ntBASIC3.71□□□□□ -1.82
LDLRP01130 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.71□□□□□ -1.82
LDLRP01130 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.71□□□□□ -1.82
LDLRP01130 AC024560.2-201ENST00000507981 1497 ntBASIC3.71□□□□□ -1.82
LDLRP01130 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
LDLRP01130 CEP170P1-201ENST00000502249 4587 ntBASIC3.71□□□□□ -1.82
LDLRP01130 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDLRP01130 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LDLRP01130 SAGE4P-201ENST00000442271 3381 ntBASIC3.71□□□□□ -1.82
LDLRP01130 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDLRP01130 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.71□□□□□ -1.82
LDLRP01130 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
LDLRP01130 AC011477.1-204ENST00000623416 1325 ntBASIC3.7□□□□□ -1.82
LDLRP01130 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDLRP01130 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDLRP01130 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDLRP01130 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDLRP01130 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LDLRP01130 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDLRP01130 RNU6-213P-201ENST00000384051 104 ntBASIC3.7□□□□□ -1.82
LDLRP01130 Y_RNA.493-201ENST00000384422 102 ntBASIC3.7□□□□□ -1.82
LDLRP01130 MTND4LP20-201ENST00000402379 270 ntBASIC3.7□□□□□ -1.82
LDLRP01130 SNORA57.3-201ENST00000411095 141 ntBASIC3.7□□□□□ -1.82
LDLRP01130 RPS15AP38-201ENST00000413110 372 ntBASIC3.7□□□□□ -1.82
LDLRP01130 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LDLRP01130 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.7□□□□□ -1.82
LDLRP01130 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.7□□□□□ -1.82
LDLRP01130 GLRXP1-201ENST00000423261 334 ntBASIC3.7□□□□□ -1.82
LDLRP01130 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.7□□□□□ -1.82
LDLRP01130 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.7□□□□□ -1.82
LDLRP01130 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms