Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RTN3O95197 RNU6-50P-201ENST00000362356 103 ntBASIC3.97□□□□□ -1.77
RTN3O95197 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTN3O95197 MIR135A2-201ENST00000384854 100 ntBASIC3.97□□□□□ -1.77
RTN3O95197 MIR670-201ENST00000390142 98 ntBASIC3.97□□□□□ -1.77
RTN3O95197 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RTN3O95197 AL049545.1-201ENST00000401856 572 ntBASIC3.97□□□□□ -1.77
RTN3O95197 RAB9AP3-201ENST00000412737 573 ntBASIC3.97□□□□□ -1.77
RTN3O95197 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.97□□□□□ -1.77
RTN3O95197 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN3O95197 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN3O95197 MTND4P20-201ENST00000424125 869 ntBASIC3.97□□□□□ -1.77
RTN3O95197 MTCO1P39-201ENST00000426148 480 ntBASIC3.97□□□□□ -1.77
RTN3O95197 AC234781.2-201ENST00000426370 994 ntBASIC3.97□□□□□ -1.77
RTN3O95197 RPS6P15-201ENST00000431996 751 ntBASIC3.97□□□□□ -1.77
RTN3O95197 RAB9AP1-201ENST00000449393 573 ntBASIC3.97□□□□□ -1.77
RTN3O95197 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.97□□□□□ -1.77
RTN3O95197 OR6C5P-201ENST00000452388 923 ntBASIC3.97□□□□□ -1.77
RTN3O95197 AC091564.1-201ENST00000464563 479 ntBASIC3.97□□□□□ -1.77
RTN3O95197 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RTN3O95197 AC078785.3-201ENST00000476607 425 ntBASIC3.97□□□□□ -1.77
RTN3O95197 AC084198.1-201ENST00000477747 402 ntBASIC3.97□□□□□ -1.77
RTN3O95197 RPL7P23-201ENST00000493874 747 ntBASIC3.97□□□□□ -1.77
RTN3O95197 AC034222.1-201ENST00000494052 532 ntBASIC3.97□□□□□ -1.77
RTN3O95197 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.97□□□□□ -1.77
RTN3O95197 AC022447.3-201ENST00000506865 495 ntBASIC3.97□□□□□ -1.77
RTN3O95197 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.97□□□□□ -1.77
RTN3O95197 MRPS33P3-201ENST00000513456 322 ntBASIC3.97□□□□□ -1.77
RTN3O95197 MTCO2P32-201ENST00000514865 403 ntBASIC3.97□□□□□ -1.77
RTN3O95197 RNU6-528P-201ENST00000516926 100 ntBASIC3.97□□□□□ -1.77
RTN3O95197 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.97□□□□□ -1.77
RTN3O95197 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.97□□□□□ -1.77
RTN3O95197 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.97□□□□□ -1.77
RTN3O95197 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN3O95197 AC008015.1-201ENST00000555505 465 ntBASIC3.97□□□□□ -1.77
RTN3O95197 AC090877.1-201ENST00000561418 344 ntBASIC3.97□□□□□ -1.77
RTN3O95197 ZNF192P1-203ENST00000565888 810 ntBASIC3.97□□□□□ -1.77
RTN3O95197 AL022099.1-201ENST00000604551 712 ntBASIC3.97□□□□□ -1.77
RTN3O95197 AL137849.1-201ENST00000604767 169 ntBASIC3.97□□□□□ -1.77
RTN3O95197 AC090425.2-201ENST00000608818 501 ntBASIC3.97□□□□□ -1.77
RTN3O95197 RMST_8.1-201ENST00000610287 165 ntBASIC3.97□□□□□ -1.77
RTN3O95197 AL355810.1-201ENST00000614629 552 ntBASIC3.97□□□□□ -1.77
RTN3O95197 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.97□□□□□ -1.77
RTN3O95197 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN3O95197 AC012442.3-202ENST00000636742 206 ntBASIC3.97□□□□□ -1.77
RTN3O95197 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.97□□□□□ -1.77
RTN3O95197 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.97□□□□□ -1.77
RTN3O95197 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
RTN3O95197 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.77
RTN3O95197 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.96□□□□□ -1.78
RTN3O95197 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.78
RTN3O95197 FRG1BP-201ENST00000278882 761 ntBASIC3.96□□□□□ -1.78
RTN3O95197 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RTN3O95197 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RTN3O95197 RNA5SP124-201ENST00000362739 110 ntBASIC3.96□□□□□ -1.78
RTN3O95197 RNU6-882P-201ENST00000391025 103 ntBASIC3.96□□□□□ -1.78
RTN3O95197 RPL17P50-201ENST00000396131 546 ntBASIC3.96□□□□□ -1.78
RTN3O95197 MIR1305-201ENST00000408300 86 ntBASIC3.96□□□□□ -1.78
RTN3O95197 RN7SKP285-201ENST00000410137 318 ntBASIC3.96□□□□□ -1.78
RTN3O95197 RNA5SP129-201ENST00000410276 118 ntBASIC3.96□□□□□ -1.78
RTN3O95197 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.96□□□□□ -1.78
RTN3O95197 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.96□□□□□ -1.78
RTN3O95197 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.96□□□□□ -1.78
RTN3O95197 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.96□□□□□ -1.78
RTN3O95197 AC004866.2-201ENST00000438285 481 ntBASIC3.96□□□□□ -1.78
RTN3O95197 TXNP1-201ENST00000441872 371 ntBASIC3.96□□□□□ -1.78
RTN3O95197 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.96□□□□□ -1.78
RTN3O95197 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.96□□□□□ -1.78
RTN3O95197 AP000542.1-201ENST00000448473 371 ntBASIC3.96□□□□□ -1.78
RTN3O95197 AC010655.1-201ENST00000449336 292 ntBASIC3.96□□□□□ -1.78
RTN3O95197 AC006480.1-201ENST00000449887 378 ntBASIC3.96□□□□□ -1.78
RTN3O95197 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.96□□□□□ -1.78
RTN3O95197 AC234775.1-201ENST00000454247 670 ntBASIC3.96□□□□□ -1.78
RTN3O95197 MTCO3P20-201ENST00000454926 688 ntBASIC3.96□□□□□ -1.78
RTN3O95197 RPL23AP31-201ENST00000456160 467 ntBASIC3.96□□□□□ -1.78
RTN3O95197 RPL30P9-201ENST00000465586 330 ntBASIC3.96□□□□□ -1.78
RTN3O95197 AC068587.2-201ENST00000478386 781 ntBASIC3.96□□□□□ -1.78
RTN3O95197 AC021382.1-201ENST00000483523 359 ntBASIC3.96□□□□□ -1.78
RTN3O95197 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.96□□□□□ -1.78
RTN3O95197 MTND1P22-201ENST00000510572 951 ntBASIC3.96□□□□□ -1.78
RTN3O95197 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.96□□□□□ -1.78
RTN3O95197 RNA5SP468-201ENST00000516782 93 ntBASIC3.96□□□□□ -1.78
RTN3O95197 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.96□□□□□ -1.78
RTN3O95197 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.96□□□□□ -1.78
RTN3O95197 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.96□□□□□ -1.78
RTN3O95197 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.96□□□□□ -1.78
RTN3O95197 OR4K8P-201ENST00000578842 1048 ntBASIC3.96□□□□□ -1.78
RTN3O95197 AL163642.2-201ENST00000604722 1019 ntBASIC3.96□□□□□ -1.78
RTN3O95197 SNORA62.6-201ENST00000606322 83 ntBASIC3.96□□□□□ -1.78
RTN3O95197 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.96□□□□□ -1.78
RTN3O95197 AC099063.3-201ENST00000642066 185 ntBASIC3.96□□□□□ -1.78
RTN3O95197 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.78
RTN3O95197 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RTN3O95197 MTCO1P9-201ENST00000505577 1534 ntBASIC3.95□□□□□ -1.78
RTN3O95197 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.95□□□□□ -1.78
RTN3O95197 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RTN3O95197 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RTN3O95197 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RTN3O95197 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RTN3O95197 AL672296.1-201ENST00000427780 2158 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms