Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.97□□□□□ -2.09
SNRNP200O75643 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.97□□□□□ -2.09
SNRNP200O75643 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.97□□□□□ -2.09
SNRNP200O75643 AC103798.2-201ENST00000624292 632 ntBASIC1.97□□□□□ -2.09
SNRNP200O75643 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.97□□□□□ -2.09
SNRNP200O75643 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.97□□□□□ -2.09
SNRNP200O75643 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SNRNP200O75643 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.96□□□□□ -2.1
SNRNP200O75643 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SNRNP200O75643 RNU1-109P-201ENST00000383960 147 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 SNORA3.2-201ENST00000408221 125 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 AC003685.2-201ENST00000422795 395 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.96□□□□□ -2.1
SNRNP200O75643 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.96□□□□□ -2.1
SNRNP200O75643 RPL23AP33-201ENST00000442301 452 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 AC010095.1-201ENST00000443543 144 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SNRNP200O75643 MTCYBP37-201ENST00000510642 1133 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.96□□□□□ -2.1
SNRNP200O75643 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.96□□□□□ -2.1
SNRNP200O75643 NOP56P3-201ENST00000549457 385 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.96□□□□□ -2.1
SNRNP200O75643 DUXAP3-201ENST00000603616 594 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.96□□□□□ -2.1
SNRNP200O75643 AL138880.2-201ENST00000616214 239 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 YWHAEP7-203ENST00000622054 312 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
SNRNP200O75643 PABPC1P7-201ENST00000413177 1513 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SNRNP200O75643 VTRNA1-1-201ENST00000363120 99 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.96□□□□□ -2.1
SNRNP200O75643 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SNRNP200O75643 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.96□□□□□ -2.1
SNRNP200O75643 AC004866.2-201ENST00000438285 481 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.96□□□□□ -2.1
SNRNP200O75643 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.96□□□□□ -2.1
SNRNP200O75643 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.96□□□□□ -2.1
SNRNP200O75643 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SNRNP200O75643 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.96□□□□□ -2.1
SNRNP200O75643 LRRC37A5P-203ENST00000580181 585 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 PCNAP1-202ENST00000595299 752 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 RPL23AP78-201ENST00000599928 470 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 AP005212.4-201ENST00000614206 710 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 AL136981.2-201ENST00000617319 734 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 RMST_5.1-201ENST00000618704 126 ntBASIC1.96□□□□□ -2.1
SNRNP200O75643 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.96□□□□□ -2.1
SNRNP200O75643 BX682237.1-201ENST00000415016 335 ntBASIC1.95□□□□□ -2.1
SNRNP200O75643 AC005005.2-201ENST00000420779 380 ntBASIC1.95□□□□□ -2.1
SNRNP200O75643 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.95□□□□□ -2.1
SNRNP200O75643 RPS26P56-201ENST00000444468 240 ntBASIC1.95□□□□□ -2.1
SNRNP200O75643 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.95□□□□□ -2.1
SNRNP200O75643 HMGN2P16-201ENST00000456802 261 ntBASIC1.95□□□□□ -2.1
SNRNP200O75643 HMGB1P38-201ENST00000490557 577 ntBASIC1.95□□□□□ -2.1
SNRNP200O75643 ARL4AP2-201ENST00000507378 601 ntBASIC1.95□□□□□ -2.1
SNRNP200O75643 EIF4EP5-201ENST00000528228 640 ntBASIC1.95□□□□□ -2.1
SNRNP200O75643 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.95□□□□□ -2.1
SNRNP200O75643 AC135776.4-201ENST00000624300 1904 ntBASIC1.95□□□□□ -2.1
SNRNP200O75643 RNA5SP139-201ENST00000364340 117 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 RNA5SP138-201ENST00000365098 114 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SNRNP200O75643 MIR9-3-201ENST00000385084 90 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 RNU2-25P-201ENST00000411041 191 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.94□□□□□ -2.1
SNRNP200O75643 AC008481.1-201ENST00000463278 396 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 AC090543.1-201ENST00000492168 485 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SNRNP200O75643 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.94□□□□□ -2.1
SNRNP200O75643 AC009901.1-201ENST00000506703 541 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 AC109635.4-202ENST00000531666 412 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 AC090616.5-202ENST00000582111 297 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 AC245128.3-201ENST00000594721 748 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 AC068790.3-201ENST00000602988 553 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 AC073387.2-201ENST00000604797 784 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 AC131902.3-201ENST00000611767 581 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 AL390240.1-201ENST00000612950 384 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 MIR6845-201ENST00000613182 61 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 AL450472.3-201ENST00000615578 367 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.94□□□□□ -2.1
SNRNP200O75643 AC015726.3-201ENST00000624501 418 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 AP000553.5-201ENST00000641933 54 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SNRNP200O75643 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SNRNP200O75643 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SNRNP200O75643 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SNRNP200O75643 U8.13-201ENST00000390842 128 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 SNORD65-201ENST00000391079 73 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SNRNP200O75643 LSM5-206ENST00000409987 504 ntTSL 5 BASIC1.94□□□□□ -2.1
SNRNP200O75643 RNA5SP508-201ENST00000411327 119 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 RNA5SP498-201ENST00000411342 120 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.94□□□□□ -2.1
SNRNP200O75643 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.94□□□□□ -2.1
SNRNP200O75643 MTATP6P4-201ENST00000427725 675 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 AC003989.2-201ENST00000440224 169 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 AC104058.1-201ENST00000448028 297 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 RPL23AP7-203ENST00000449021 469 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 AL513124.1-201ENST00000450410 614 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 TPMTP4-201ENST00000450749 678 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 RPL5P13-201ENST00000462840 709 ntBASIC1.94□□□□□ -2.1
SNRNP200O75643 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms