Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC104237.2-201ENST00000612456 443 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AL163051.2-201ENST00000618976 735 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AP003122.6-201ENST00000623831 495 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AC233263.6-201ENST00000631132 1963 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 SGO1P2-201ENST00000429458 1589 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 RNU6-1027P-201ENST00000383998 107 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 RNU6-883P-201ENST00000384597 107 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 RNU6-77P-201ENST00000410554 91 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 RNU6-712P-201ENST00000410558 100 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AL024507.1-201ENST00000412741 274 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 MORF4L1P7-201ENST00000426038 703 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AC129850.1-201ENST00000436203 508 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AC092170.1-201ENST00000440211 356 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 UBBP3-201ENST00000445497 241 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AC004022.1-201ENST00000447766 1066 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 RNA5SP310-201ENST00000459084 116 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 RPS3AP43-201ENST00000479743 781 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 SNRPGP16-201ENST00000533275 226 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 DNAJC8P1-201ENST00000554535 372 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AL391156.1-201ENST00000554965 554 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 VN1R92P-201ENST00000598511 928 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AC006329.2-201ENST00000611491 394 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AC006249.1-201ENST00000621223 471 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AC098679.5-201ENST00000624394 571 ntBASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.66□□□□□ -1.98
USH1CQ9Y6N9 AC244517.1-201ENST00000606030 2086 ntBASIC2.65□□□□□ -1.98
USH1CQ9Y6N9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.65□□□□□ -1.98
USH1CQ9Y6N9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.65□□□□□ -1.98
USH1CQ9Y6N9 MTCO1P6-201ENST00000481192 1384 ntBASIC2.65□□□□□ -1.98
USH1CQ9Y6N9 AC111188.2-201ENST00000529697 1387 ntBASIC2.65□□□□□ -1.98
USH1CQ9Y6N9 RNU1-100P-201ENST00000365255 165 ntBASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 MIR634-201ENST00000385208 97 ntBASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 RNA5SP210-201ENST00000391034 120 ntBASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 UBE2V1P6-201ENST00000430840 422 ntBASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 RPL23AP58-201ENST00000440453 469 ntBASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 AP000852.1-201ENST00000472460 573 ntBASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 AC108729.2-201ENST00000476543 840 ntBASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 AC126182.1-201ENST00000478134 357 ntBASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 AC096751.1-202ENST00000502691 1067 ntBASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 SNORA31.8-201ENST00000516327 108 ntBASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 RNU6-751P-201ENST00000516382 101 ntBASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 AC095057.3-201ENST00000567102 1157 ntBASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 AC124312.4-201ENST00000605533 310 ntBASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.65□□□□□ -1.99
USH1CQ9Y6N9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 SNORA48.2-201ENST00000390926 124 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 RPL21P32-201ENST00000419877 477 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 AL606495.1-201ENST00000422100 813 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 AC022018.1-201ENST00000430685 241 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 AC112220.1-201ENST00000434628 355 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 RPS20P5-201ENST00000434808 360 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 CR769767.1-201ENST00000436337 346 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 RPS12P2-201ENST00000439728 269 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 AC112492.1-201ENST00000449607 712 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 OR51B8P-201ENST00000449892 769 ntBASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.64□□□□□ -1.99
USH1CQ9Y6N9 RPL23AP31-201ENST00000456160 467 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms