Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 AC025588.3-201ENST00000604182 274 ntBASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 MIR6885-201ENST00000612241 66 ntBASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
VPS9D1Q9Y2B5 AC007529.1-201ENST00000418574 2178 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 AC073365.1-203ENST00000641055 1992 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 RNA5SP485-201ENST00000365053 119 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 Y_RNA.446-201ENST00000384178 104 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 RNU2-2P-201ENST00000410396 191 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 RN7SL221P-201ENST00000466190 281 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 COPS8P2-201ENST00000473228 627 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 RN7SL326P-201ENST00000477493 296 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 AC114728.1-201ENST00000488289 483 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 KHDC1P1-201ENST00000511053 508 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 RNU6-27P-201ENST00000516146 107 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 RNU6-168P-201ENST00000516189 101 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 AC090281.1-201ENST00000523019 276 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 SNRPGP16-201ENST00000533275 226 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 AC055872.1-201ENST00000570978 278 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 MIR5582-201ENST00000579697 68 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 MIR4423-201ENST00000580922 80 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 RNU2-4P-201ENST00000606190 192 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 U2.15-201ENST00000611544 191 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 U2.16-201ENST00000613119 191 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 U2.12-201ENST00000613778 191 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 U2.9-201ENST00000615427 191 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 U2.11-201ENST00000616345 191 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 U2.2-201ENST00000616535 191 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 U2.3-201ENST00000617785 191 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 U2.19-201ENST00000618602 191 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 RNU2-1-201ENST00000618664 191 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 U2.6-201ENST00000619225 191 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 U2.5-201ENST00000619465 191 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 U2.10-201ENST00000620268 191 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 MIR6811-201ENST00000620409 58 ntBASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VPS9D1Q9Y2B5 GUCY1B2-204ENST00000531898 1979 ntBASIC6.27□□□□□ -1.4
VPS9D1Q9Y2B5 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
VPS9D1Q9Y2B5 AC079753.1-201ENST00000623243 3868 ntBASIC6.27□□□□□ -1.4
VPS9D1Q9Y2B5 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 TTC41P-205ENST00000551270 3963 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 Y_RNA.182-201ENST00000363880 111 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 RNU4-11P-201ENST00000365287 132 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 SNORD51-201ENST00000384320 80 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 RNA5SP251-201ENST00000410614 137 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 POU5F1P5-201ENST00000445059 658 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 AC073901.1-201ENST00000462471 408 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 RN7SL369P-201ENST00000477138 299 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 HMGN1P11-201ENST00000508668 303 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 RNA5SP418-201ENST00000515951 117 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 RNU7-121P-201ENST00000516604 62 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 ATP5F1P5-201ENST00000526403 760 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 EDDM3DP-201ENST00000554692 434 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 AC024267.2-201ENST00000582737 417 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 AC005332.4-201ENST00000592752 579 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 AC024940.4-201ENST00000605507 246 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 AC211486.4-201ENST00000621495 113 ntBASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VPS9D1Q9Y2B5 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms