Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 USP9YP11-201ENST00000427537 717 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 AL035407.1-201ENST00000429211 571 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 RPL21P112-201ENST00000434403 463 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 RPL21P134-201ENST00000453468 483 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 MTCO3P11-201ENST00000455103 774 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 USP9YP25-201ENST00000457708 443 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 AC010625.1-201ENST00000511296 403 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 AC026801.2-201ENST00000515352 425 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 OR4P1P-201ENST00000530808 1136 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 UBL5P2-201ENST00000583788 219 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 AL359715.5-201ENST00000623431 443 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 AC018692.3-201ENST00000623929 123 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 MIR1322-201ENST00000638013 71 ntBASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SHROOM4Q9ULL8 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 RNU6-1249P-201ENST00000363237 111 ntBASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 Y_RNA.192-201ENST00000363977 102 ntBASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 MIR1261-201ENST00000408659 82 ntBASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 AIMP1P1-201ENST00000418670 937 ntBASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 MTCO3P35-201ENST00000485582 781 ntBASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 NCOR1P1-202ENST00000486162 291 ntBASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 SNORA70.19-201ENST00000516717 90 ntBASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 REXO2-218ENST00000544827 880 ntTSL 3 BASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 AC006329.2-201ENST00000611491 394 ntBASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 AC006386.1-201ENST00000619436 415 ntBASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 AC006927.4-201ENST00000639187 543 ntBASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 AL079343.1-201ENST00000572358 1771 ntBASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 AL390862.1-201ENST00000635467 1469 ntBASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM4Q9ULL8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 RPL23AP82-202ENST00000427528 469 ntBASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 RPL12P26-201ENST00000452430 487 ntBASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 CENPBD1P1-201ENST00000464061 469 ntBASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 AC005921.1-201ENST00000510589 286 ntBASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 HSPA8P13-201ENST00000523715 472 ntBASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 AL512347.1-201ENST00000566420 503 ntBASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 MIR4319-201ENST00000577285 85 ntBASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 AC103858.2-201ENST00000621471 543 ntBASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 AL137790.1-201ENST00000634283 177 ntBASIC6.09□□□□□ -1.44
SHROOM4Q9ULL8 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 AC096644.4-201ENST00000563417 2912 ntBASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 AL583834.1-201ENST00000406943 343 ntBASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 RNA5SP184-201ENST00000411071 108 ntBASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 AC068533.2-201ENST00000411872 306 ntBASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 HMGB1P49-201ENST00000418882 569 ntBASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 GLRXP1-201ENST00000423261 334 ntBASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 COX7BP2-201ENST00000437976 242 ntBASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 KRTAP19-11P-201ENST00000439851 104 ntBASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 AL135938.1-201ENST00000443141 297 ntBASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 ELOCP13-201ENST00000443934 329 ntBASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 RPL18AP17-201ENST00000455326 198 ntBASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 AC068724.1-201ENST00000487100 792 ntBASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 AC114981.1-201ENST00000503897 678 ntBASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 AC020699.1-201ENST00000505161 445 ntBASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 FABP5P12-201ENST00000515543 389 ntBASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC6.08□□□□□ -1.44
SHROOM4Q9ULL8 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms