Protein–RNA interactions for Protein: Q9NY46

SCN3A, Sodium channel protein type 3 subunit alpha, humanhuman

Predictions only

Length 2,000 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3AQ9NY46 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 AC107954.1-201ENST00000565906 727 ntBASIC2.07□□□□□ -2.08
SCN3AQ9NY46 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 MIR4524B-201ENST00000581569 115 ntBASIC2.07□□□□□ -2.08
SCN3AQ9NY46 MIR4448-201ENST00000584360 86 ntBASIC2.07□□□□□ -2.08
SCN3AQ9NY46 AC104763.2-201ENST00000604179 382 ntBASIC2.07□□□□□ -2.08
SCN3AQ9NY46 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 AL024474.1-201ENST00000404655 591 ntBASIC2.07□□□□□ -2.08
SCN3AQ9NY46 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 AC006548.1-201ENST00000427470 102 ntBASIC2.07□□□□□ -2.08
SCN3AQ9NY46 NDUFA5P10-201ENST00000432147 357 ntBASIC2.07□□□□□ -2.08
SCN3AQ9NY46 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 TRBV26-201ENST00000456572 344 ntBASIC2.07□□□□□ -2.08
SCN3AQ9NY46 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 RNU6-491P-201ENST00000516099 110 ntBASIC2.07□□□□□ -2.08
SCN3AQ9NY46 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 AC090616.5-202ENST00000582111 297 ntBASIC2.07□□□□□ -2.08
SCN3AQ9NY46 AP000787.2-201ENST00000604432 568 ntBASIC2.07□□□□□ -2.08
SCN3AQ9NY46 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 CR381572.1-201ENST00000625098 102 ntBASIC2.07□□□□□ -2.08
SCN3AQ9NY46 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN3AQ9NY46 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 NSRP1P1-201ENST00000444067 1693 ntBASIC2.06□□□□□ -2.08
SCN3AQ9NY46 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 RNU6-1293P-201ENST00000384077 107 ntBASIC2.06□□□□□ -2.08
SCN3AQ9NY46 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 Z98742.3-201ENST00000418637 326 ntBASIC2.06□□□□□ -2.08
SCN3AQ9NY46 MTCYBP24-201ENST00000420387 1106 ntBASIC2.06□□□□□ -2.08
SCN3AQ9NY46 DPPA2P1-201ENST00000428060 556 ntBASIC2.06□□□□□ -2.08
SCN3AQ9NY46 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 AC106872.3-201ENST00000495104 446 ntBASIC2.06□□□□□ -2.08
SCN3AQ9NY46 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 MTCYBP37-201ENST00000510642 1133 ntBASIC2.06□□□□□ -2.08
SCN3AQ9NY46 IGKV2-36-201ENST00000519999 223 ntBASIC2.06□□□□□ -2.08
SCN3AQ9NY46 OR4V1P-201ENST00000525394 1140 ntBASIC2.06□□□□□ -2.08
SCN3AQ9NY46 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 BDH2P1-201ENST00000602288 736 ntBASIC2.06□□□□□ -2.08
SCN3AQ9NY46 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 NF1P10-201ENST00000613227 742 ntBASIC2.06□□□□□ -2.08
SCN3AQ9NY46 RNU6-156P-201ENST00000621869 107 ntBASIC2.06□□□□□ -2.08
SCN3AQ9NY46 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.06□□□□□ -2.08
SCN3AQ9NY46 AC244517.1-201ENST00000606030 2086 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SCN3AQ9NY46 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.05□□□□□ -2.08
SCN3AQ9NY46 VTRNA1-1-201ENST00000363120 99 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 RNU6-98P-201ENST00000384173 107 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 RNU6-253P-201ENST00000384730 105 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 MIR221-201ENST00000385135 110 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SCN3AQ9NY46 UBE2V1P5-201ENST00000440070 405 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.05□□□□□ -2.08
SCN3AQ9NY46 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.05□□□□□ -2.08
SCN3AQ9NY46 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN3AQ9NY46 snoU13.26-201ENST00000459452 105 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.05□□□□□ -2.08
SCN3AQ9NY46 MTCYBP41-201ENST00000528913 1123 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 OR5BN1P-201ENST00000532955 829 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.05□□□□□ -2.08
SCN3AQ9NY46 MTCO3P24-201ENST00000572729 782 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 AC009977.1-201ENST00000586015 570 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.05□□□□□ -2.08
SCN3AQ9NY46 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.05□□□□□ -2.08
SCN3AQ9NY46 AL133393.1-201ENST00000603277 287 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 AC087241.4-201ENST00000612441 480 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN3AQ9NY46 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SCN3AQ9NY46 RNU1-73P-201ENST00000383971 164 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 AL138880.1-201ENST00000405824 642 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 RPL7P10-201ENST00000417407 739 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 AC023128.2-201ENST00000420880 1223 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 PSMA2P3-201ENST00000429685 675 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.05□□□□□ -2.08
SCN3AQ9NY46 UBE2D3P1-201ENST00000436669 444 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 AC104058.1-201ENST00000448028 297 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 AL118520.1-201ENST00000450770 291 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.05□□□□□ -2.08
SCN3AQ9NY46 AC073901.1-201ENST00000462471 408 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 AC107222.1-201ENST00000510899 637 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 RNU1-61P-201ENST00000516107 151 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 RNU6-56P-201ENST00000516986 93 ntBASIC2.05□□□□□ -2.08
SCN3AQ9NY46 AC104986.1-201ENST00000517978 436 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms