Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CHD8Q9HCK8 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CHD8Q9HCK8 AL445685.2-201ENST00000422551 342 ntBASIC1.92□□□□□ -2.1
CHD8Q9HCK8 AL606490.7-201ENST00000433136 191 ntBASIC1.92□□□□□ -2.1
CHD8Q9HCK8 RPL7P5-201ENST00000471472 736 ntBASIC1.92□□□□□ -2.1
CHD8Q9HCK8 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
CHD8Q9HCK8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.92□□□□□ -2.1
CHD8Q9HCK8 VWA8P1-201ENST00000510889 176 ntBASIC1.92□□□□□ -2.1
CHD8Q9HCK8 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.92□□□□□ -2.1
CHD8Q9HCK8 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.92□□□□□ -2.1
CHD8Q9HCK8 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC1.92□□□□□ -2.1
CHD8Q9HCK8 MTND4P1-201ENST00000457501 1466 ntBASIC1.92□□□□□ -2.1
CHD8Q9HCK8 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
CHD8Q9HCK8 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CHD8Q9HCK8 MIR21-201ENST00000362134 72 ntBASIC1.92□□□□□ -2.1
CHD8Q9HCK8 RNU6-115P-201ENST00000364310 107 ntBASIC1.92□□□□□ -2.1
CHD8Q9HCK8 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CHD8Q9HCK8 AL445183.3-201ENST00000414168 502 ntBASIC1.92□□□□□ -2.1
CHD8Q9HCK8 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC1.92□□□□□ -2.1
CHD8Q9HCK8 AC004263.1-201ENST00000479327 332 ntBASIC1.92□□□□□ -2.1
CHD8Q9HCK8 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC1.92□□□□□ -2.1
CHD8Q9HCK8 CR383656.8-201ENST00000549046 145 ntBASIC1.92□□□□□ -2.1
CHD8Q9HCK8 FAM106DP-201ENST00000586416 501 ntBASIC1.92□□□□□ -2.1
CHD8Q9HCK8 AC009831.4-201ENST00000620744 325 ntBASIC1.92□□□□□ -2.1
CHD8Q9HCK8 SEPT7P7-201ENST00000420492 1301 ntBASIC1.92□□□□□ -2.1
CHD8Q9HCK8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.91□□□□□ -2.1
CHD8Q9HCK8 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC1.91□□□□□ -2.1
CHD8Q9HCK8 RNU1-42P-201ENST00000364033 160 ntBASIC1.91□□□□□ -2.1
CHD8Q9HCK8 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CHD8Q9HCK8 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC1.91□□□□□ -2.1
CHD8Q9HCK8 FAM92A1P1-201ENST00000528023 890 ntBASIC1.91□□□□□ -2.1
CHD8Q9HCK8 AP000857.1-201ENST00000532151 543 ntBASIC1.91□□□□□ -2.1
CHD8Q9HCK8 DNAJC8P1-201ENST00000554535 372 ntBASIC1.91□□□□□ -2.1
CHD8Q9HCK8 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.91□□□□□ -2.1
CHD8Q9HCK8 AC120053.1-201ENST00000607706 736 ntBASIC1.91□□□□□ -2.1
CHD8Q9HCK8 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.91□□□□□ -2.1
CHD8Q9HCK8 uc_338.5-201ENST00000611839 155 ntBASIC1.91□□□□□ -2.1
CHD8Q9HCK8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CHD8Q9HCK8 AC007256.1-201ENST00000392253 2765 ntBASIC1.91□□□□□ -2.1
CHD8Q9HCK8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CHD8Q9HCK8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
CHD8Q9HCK8 RNA5SP127-201ENST00000411051 133 ntBASIC1.91□□□□□ -2.1
CHD8Q9HCK8 RHEBP3-201ENST00000411920 351 ntBASIC1.91□□□□□ -2.1
CHD8Q9HCK8 RAD23BP2-201ENST00000416003 1207 ntBASIC1.91□□□□□ -2.1
CHD8Q9HCK8 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.91□□□□□ -2.1
CHD8Q9HCK8 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.91□□□□□ -2.1
CHD8Q9HCK8 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.91□□□□□ -2.1
CHD8Q9HCK8 FABP5P5-201ENST00000515537 406 ntBASIC1.91□□□□□ -2.1
CHD8Q9HCK8 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC1.91□□□□□ -2.1
CHD8Q9HCK8 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.91□□□□□ -2.1
CHD8Q9HCK8 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.91□□□□□ -2.1
CHD8Q9HCK8 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CHD8Q9HCK8 ZNF734P-201ENST00000419494 1534 ntBASIC1.9□□□□□ -2.1
CHD8Q9HCK8 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CHD8Q9HCK8 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC1.9□□□□□ -2.11
CHD8Q9HCK8 MIR216A-201ENST00000385063 110 ntBASIC1.9□□□□□ -2.11
CHD8Q9HCK8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.9□□□□□ -2.11
CHD8Q9HCK8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.9□□□□□ -2.11
CHD8Q9HCK8 AC093278.1-201ENST00000494700 600 ntBASIC1.9□□□□□ -2.11
CHD8Q9HCK8 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC1.9□□□□□ -2.11
CHD8Q9HCK8 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.9□□□□□ -2.11
CHD8Q9HCK8 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC1.9□□□□□ -2.11
CHD8Q9HCK8 AC008127.2-201ENST00000549925 1075 ntBASIC1.9□□□□□ -2.11
CHD8Q9HCK8 AL390334.1-201ENST00000556395 450 ntBASIC1.9□□□□□ -2.11
CHD8Q9HCK8 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.9□□□□□ -2.11
CHD8Q9HCK8 AC015911.5-201ENST00000587076 451 ntBASIC1.9□□□□□ -2.11
CHD8Q9HCK8 AC090970.3-201ENST00000612566 866 ntBASIC1.9□□□□□ -2.11
CHD8Q9HCK8 AC243773.3-201ENST00000613270 256 ntBASIC1.9□□□□□ -2.11
CHD8Q9HCK8 AC008432.1-201ENST00000615912 1320 ntBASIC1.9□□□□□ -2.11
CHD8Q9HCK8 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC1.9□□□□□ -2.11
CHD8Q9HCK8 AC110774.1-201ENST00000623567 2018 ntBASIC1.9□□□□□ -2.11
CHD8Q9HCK8 VN1R31P-201ENST00000417498 730 ntBASIC1.9□□□□□ -2.11
CHD8Q9HCK8 AC244505.5-201ENST00000443639 207 ntBASIC1.9□□□□□ -2.11
CHD8Q9HCK8 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC1.9□□□□□ -2.11
CHD8Q9HCK8 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC1.9□□□□□ -2.11
CHD8Q9HCK8 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.9□□□□□ -2.11
CHD8Q9HCK8 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.9□□□□□ -2.11
CHD8Q9HCK8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CHD8Q9HCK8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.89□□□□□ -2.11
CHD8Q9HCK8 AL136164.4-201ENST00000625013 2135 ntBASIC1.89□□□□□ -2.11
CHD8Q9HCK8 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CHD8Q9HCK8 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CHD8Q9HCK8 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.89□□□□□ -2.11
CHD8Q9HCK8 OR4G11P-202ENST00000642116 1414 ntBASIC1.89□□□□□ -2.11
CHD8Q9HCK8 MIR193B-201ENST00000384907 83 ntBASIC1.89□□□□□ -2.11
CHD8Q9HCK8 RPS20P25-201ENST00000412447 352 ntBASIC1.89□□□□□ -2.11
CHD8Q9HCK8 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.89□□□□□ -2.11
CHD8Q9HCK8 AL590762.3-201ENST00000436372 640 ntBASIC1.89□□□□□ -2.11
CHD8Q9HCK8 HMGB1P31-201ENST00000437242 427 ntBASIC1.89□□□□□ -2.11
CHD8Q9HCK8 AL691517.1-201ENST00000440833 1235 ntBASIC1.89□□□□□ -2.11
CHD8Q9HCK8 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CHD8Q9HCK8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.89□□□□□ -2.11
CHD8Q9HCK8 AC083760.1-201ENST00000589621 670 ntBASIC1.89□□□□□ -2.11
CHD8Q9HCK8 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.89□□□□□ -2.11
CHD8Q9HCK8 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CHD8Q9HCK8 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.89□□□□□ -2.11
CHD8Q9HCK8 PIGFP3-201ENST00000441918 722 ntBASIC1.89□□□□□ -2.11
CHD8Q9HCK8 FGF7P3-201ENST00000454645 303 ntBASIC1.89□□□□□ -2.11
CHD8Q9HCK8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.89□□□□□ -2.11
CHD8Q9HCK8 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms