Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC091834.1-201ENST00000614543 472 ntBASIC1.74□□□□□ -2.13
SPG11Q96JI7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SPG11Q96JI7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.74□□□□□ -2.13
SPG11Q96JI7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SPG11Q96JI7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SPG11Q96JI7 OR5H15-201ENST00000383696 930 ntBASIC1.74□□□□□ -2.13
SPG11Q96JI7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SPG11Q96JI7 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.74□□□□□ -2.13
SPG11Q96JI7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.74□□□□□ -2.13
SPG11Q96JI7 AC009237.8-201ENST00000445492 379 ntBASIC1.74□□□□□ -2.13
SPG11Q96JI7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.74□□□□□ -2.13
SPG11Q96JI7 RPL36AP33-201ENST00000450395 310 ntBASIC1.74□□□□□ -2.13
SPG11Q96JI7 RPL23AP55-201ENST00000498163 452 ntBASIC1.74□□□□□ -2.13
SPG11Q96JI7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.74□□□□□ -2.13
SPG11Q96JI7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.74□□□□□ -2.13
SPG11Q96JI7 AC006116.7-201ENST00000590141 756 ntBASIC1.74□□□□□ -2.13
SPG11Q96JI7 MIR6733-201ENST00000635723 61 ntBASIC1.74□□□□□ -2.13
SPG11Q96JI7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SPG11Q96JI7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SPG11Q96JI7 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC1.73□□□□□ -2.13
SPG11Q96JI7 MAPK10-266ENST00000641066 6555 ntBASIC1.73□□□□□ -2.13
SPG11Q96JI7 AC004263.1-201ENST00000479327 332 ntBASIC1.73□□□□□ -2.13
SPG11Q96JI7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC1.73□□□□□ -2.13
SPG11Q96JI7 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.73□□□□□ -2.13
SPG11Q96JI7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.73□□□□□ -2.13
SPG11Q96JI7 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.73□□□□□ -2.13
SPG11Q96JI7 AL845331.3-202ENST00000562856 261 ntBASIC1.73□□□□□ -2.13
SPG11Q96JI7 AC012182.1-201ENST00000570133 895 ntBASIC1.73□□□□□ -2.13
SPG11Q96JI7 AC099654.11-201ENST00000638857 294 ntBASIC1.73□□□□□ -2.13
SPG11Q96JI7 MTND5P27-201ENST00000428871 1720 ntBASIC1.73□□□□□ -2.13
SPG11Q96JI7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SPG11Q96JI7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SPG11Q96JI7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SPG11Q96JI7 NDUFB4P5-201ENST00000415445 361 ntBASIC1.72□□□□□ -2.13
SPG11Q96JI7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.72□□□□□ -2.13
SPG11Q96JI7 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.72□□□□□ -2.13
SPG11Q96JI7 RN7SL297P-201ENST00000483161 293 ntBASIC1.72□□□□□ -2.13
SPG11Q96JI7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.72□□□□□ -2.13
SPG11Q96JI7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SPG11Q96JI7 AC093331.1-201ENST00000521474 169 ntBASIC1.72□□□□□ -2.13
SPG11Q96JI7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
SPG11Q96JI7 AC019159.1-201ENST00000605094 187 ntBASIC1.72□□□□□ -2.13
SPG11Q96JI7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.72□□□□□ -2.13
SPG11Q96JI7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SPG11Q96JI7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SPG11Q96JI7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SPG11Q96JI7 U8.8-201ENST00000365399 135 ntBASIC1.72□□□□□ -2.13
SPG11Q96JI7 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SPG11Q96JI7 DEFA7P-201ENST00000382676 285 ntBASIC1.72□□□□□ -2.13
SPG11Q96JI7 Y_RNA.393-201ENST00000383936 102 ntBASIC1.72□□□□□ -2.13
SPG11Q96JI7 SNORA48.3-201ENST00000391081 134 ntBASIC1.72□□□□□ -2.13
SPG11Q96JI7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.72□□□□□ -2.13
SPG11Q96JI7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.72□□□□□ -2.13
SPG11Q96JI7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.72□□□□□ -2.13
SPG11Q96JI7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.72□□□□□ -2.13
SPG11Q96JI7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.72□□□□□ -2.13
SPG11Q96JI7 AL645939.1-201ENST00000453429 797 ntBASIC1.72□□□□□ -2.13
SPG11Q96JI7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.72□□□□□ -2.13
SPG11Q96JI7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.72□□□□□ -2.13
SPG11Q96JI7 RNA5SP76-201ENST00000516277 87 ntBASIC1.72□□□□□ -2.13
SPG11Q96JI7 AC011712.1-201ENST00000588959 234 ntBASIC1.72□□□□□ -2.13
SPG11Q96JI7 AL359198.2-201ENST00000611836 194 ntBASIC1.72□□□□□ -2.13
SPG11Q96JI7 AC084035.1-201ENST00000634543 607 ntBASIC1.72□□□□□ -2.13
SPG11Q96JI7 LRRC77P-213ENST00000637727 880 ntBASIC1.72□□□□□ -2.13
SPG11Q96JI7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
SPG11Q96JI7 RNA5SP62-201ENST00000363457 110 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 SNORA70.7-201ENST00000384159 133 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 SNORA51.12-201ENST00000384448 134 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 AC004965.1-201ENST00000413033 213 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 RPL23AP39-201ENST00000415533 405 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 AC027124.2-201ENST00000428249 105 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 AC244505.4-201ENST00000434905 287 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 SSXP5-201ENST00000443473 287 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 TTC39CP1-201ENST00000512513 755 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 AC073387.2-201ENST00000604797 784 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 Y_RNA.783-201ENST00000613546 102 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.71□□□□□ -2.14
SPG11Q96JI7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SPG11Q96JI7 AC093909.5-201ENST00000621839 1799 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.71□□□□□ -2.14
SPG11Q96JI7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
SPG11Q96JI7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC1.71□□□□□ -2.14
SPG11Q96JI7 AL391987.6-201ENST00000305671 199 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 RNA5SP190-201ENST00000365222 118 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 AL353597.2-202ENST00000434901 373 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.71□□□□□ -2.14
SPG11Q96JI7 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.71□□□□□ -2.14
SPG11Q96JI7 AC233279.1-201ENST00000455300 423 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.71□□□□□ -2.14
SPG11Q96JI7 RPS27P27-201ENST00000498779 255 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 RNA5SP182-201ENST00000516064 82 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC1.71□□□□□ -2.14
SPG11Q96JI7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.71□□□□□ -2.14
SPG11Q96JI7 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.71□□□□□ -2.14
SPG11Q96JI7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.71□□□□□ -2.14
SPG11Q96JI7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
SPG11Q96JI7 AC000367.1-201ENST00000452711 1766 ntBASIC1.71□□□□□ -2.14
SPG11Q96JI7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SPG11Q96JI7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms