Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 RN7SKP185-201ENST00000362813 326 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 SNORA4.3-201ENST00000365564 137 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 RNU6-946P-201ENST00000383878 107 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 Y_RNA.579-201ENST00000390939 94 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 RN7SKP140-201ENST00000411196 284 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 IFNA20P-201ENST00000436840 528 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 TDGF1P1-201ENST00000445734 527 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AL031584.1-201ENST00000447169 754 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 FABP5P13-201ENST00000452144 328 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AC130509.1-201ENST00000464158 433 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 RN7SL443P-201ENST00000464331 290 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 RPL21P8-201ENST00000465083 535 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 GMPSP1-201ENST00000514075 579 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AF186190.1-201ENST00000517470 480 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 IGKV1-32-201ENST00000519290 311 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 ERHP1-201ENST00000523006 310 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AP004371.1-201ENST00000525240 214 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 PSMA2P1-201ENST00000526365 646 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AC024619.4-201ENST00000580924 316 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 PRPF19P1-201ENST00000584766 898 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AC174048.1-201ENST00000603389 144 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AL022099.1-201ENST00000604551 712 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AC124303.1-201ENST00000605703 360 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 HMGN2P28-201ENST00000606102 262 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 MFSD8-216ENST00000641147 4009 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 MTND5P1-201ENST00000445440 1375 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 MTND5P16-201ENST00000460269 1703 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 AP002512.4-202ENST00000641599 4530 ntBASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NPAS4Q8IUM7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 MAPK10-263ENST00000641052 4307 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 TPTE2P4-201ENST00000258589 1605 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 MIR369-201ENST00000362155 70 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 Y_RNA.422-201ENST00000384054 114 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 Y_RNA.459-201ENST00000384251 102 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 Y_RNA.576-201ENST00000384781 102 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 RPS16P5-201ENST00000406501 404 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 MTND3P8-201ENST00000412909 339 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 AC114491.1-201ENST00000416095 246 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 AC018630.2-202ENST00000422992 927 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 H3F3BP1-201ENST00000440551 403 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 AC073264.2-201ENST00000448886 166 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 RPS11P1-201ENST00000451072 473 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 SNORD19B-201ENST00000459623 84 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 RN7SL481P-201ENST00000477764 299 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 VN1R105P-201ENST00000486595 910 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 RN7SKP256-201ENST00000517201 314 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 AL137161.1-201ENST00000532231 390 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 SCOCP1-201ENST00000554676 349 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 RPL23AP84-201ENST00000571193 464 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 XIAPP1-201ENST00000603162 600 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 AC136443.5-201ENST00000603741 370 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 AC008745.1-201ENST00000604064 271 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 AL022345.1-201ENST00000607292 135 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 AL158196.1-201ENST00000616786 434 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 MTND4P35-201ENST00000604257 1375 ntBASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NPAS4Q8IUM7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms