Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 HSPE1P28-201ENST00000443139 211 ntBASIC1.54□□□□□ -2.16
VPS13CQ709C8 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.54□□□□□ -2.16
VPS13CQ709C8 AC131902.3-201ENST00000611767 581 ntBASIC1.54□□□□□ -2.16
VPS13CQ709C8 HPVC1-201ENST00000629899 1198 ntBASIC1.54□□□□□ -2.16
VPS13CQ709C8 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
VPS13CQ709C8 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
VPS13CQ709C8 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
VPS13CQ709C8 AC140059.1-201ENST00000489238 361 ntBASIC1.53□□□□□ -2.16
VPS13CQ709C8 ARL4AP2-201ENST00000507378 601 ntBASIC1.53□□□□□ -2.16
VPS13CQ709C8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.53□□□□□ -2.16
VPS13CQ709C8 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS13CQ709C8 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.53□□□□□ -2.16
VPS13CQ709C8 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS13CQ709C8 ZNF355P-201ENST00000427301 3216 ntBASIC1.53□□□□□ -2.16
VPS13CQ709C8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
VPS13CQ709C8 AC022336.2-201ENST00000568966 2538 ntBASIC1.53□□□□□ -2.16
VPS13CQ709C8 PROS2P-201ENST00000474651 1951 ntBASIC1.53□□□□□ -2.16
VPS13CQ709C8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS13CQ709C8 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS13CQ709C8 HMGN1P33-201ENST00000432945 451 ntBASIC1.53□□□□□ -2.16
VPS13CQ709C8 MTND2P29-201ENST00000438595 412 ntBASIC1.53□□□□□ -2.16
VPS13CQ709C8 AC011352.3-201ENST00000505162 593 ntBASIC1.53□□□□□ -2.16
VPS13CQ709C8 RPL23AP61-201ENST00000623642 466 ntBASIC1.53□□□□□ -2.16
VPS13CQ709C8 AC233981.2-201ENST00000611524 1614 ntBASIC1.53□□□□□ -2.16
VPS13CQ709C8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
VPS13CQ709C8 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.53□□□□□ -2.16
VPS13CQ709C8 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.53□□□□□ -2.16
VPS13CQ709C8 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
VPS13CQ709C8 AC107021.2-201ENST00000567714 2095 ntBASIC1.53□□□□□ -2.16
VPS13CQ709C8 MIR708-201ENST00000390708 88 ntBASIC1.53□□□□□ -2.17
VPS13CQ709C8 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.53□□□□□ -2.17
VPS13CQ709C8 HMGB3P15-201ENST00000507326 574 ntBASIC1.53□□□□□ -2.17
VPS13CQ709C8 AC068339.2-201ENST00000534395 618 ntBASIC1.53□□□□□ -2.17
VPS13CQ709C8 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.53□□□□□ -2.17
VPS13CQ709C8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13CQ709C8 AC013404.1-201ENST00000413068 249 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 AC009314.1-201ENST00000603871 304 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 AC024560.3-201ENST00000608482 349 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 MIR6767-201ENST00000637302 66 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
VPS13CQ709C8 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
VPS13CQ709C8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13CQ709C8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13CQ709C8 SNORA51.4-201ENST00000364993 124 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 ATP5F1P1-201ENST00000433775 569 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 RNU6-717P-201ENST00000459076 104 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS13CQ709C8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS13CQ709C8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13CQ709C8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13CQ709C8 RNU6-53P-201ENST00000365367 106 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 FO393414.1-201ENST00000428697 1184 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 AL645939.1-201ENST00000453429 797 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.52□□□□□ -2.17
VPS13CQ709C8 snoU109.4-201ENST00000458953 143 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 AC011604.1-201ENST00000545978 196 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 AC012119.1-201ENST00000603184 222 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 MTND5P27-201ENST00000428871 1720 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 AL353746.1-201ENST00000566293 6881 ntBASIC1.52□□□□□ -2.17
VPS13CQ709C8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13CQ709C8 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
VPS13CQ709C8 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
VPS13CQ709C8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 AL591704.1-201ENST00000432574 275 ntBASIC1.51□□□□□ -2.17
VPS13CQ709C8 BX322784.1-201ENST00000455793 1077 ntBASIC1.51□□□□□ -2.17
VPS13CQ709C8 AC087441.2-201ENST00000529141 262 ntBASIC1.51□□□□□ -2.17
VPS13CQ709C8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
VPS13CQ709C8 AL513331.1-201ENST00000411908 397 ntBASIC1.51□□□□□ -2.17
VPS13CQ709C8 USP9YP15-201ENST00000442391 422 ntBASIC1.51□□□□□ -2.17
VPS13CQ709C8 AC021146.8-201ENST00000507455 733 ntBASIC1.51□□□□□ -2.17
VPS13CQ709C8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 AC022634.1-201ENST00000520765 532 ntBASIC1.51□□□□□ -2.17
VPS13CQ709C8 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
VPS13CQ709C8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 RPS4XP11-201ENST00000446897 772 ntBASIC1.51□□□□□ -2.17
VPS13CQ709C8 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 AC005730.3-201ENST00000583067 366 ntBASIC1.51□□□□□ -2.17
VPS13CQ709C8 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS13CQ709C8 VN1R7P-201ENST00000619242 903 ntBASIC1.51□□□□□ -2.17
VPS13CQ709C8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS13CQ709C8 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VPS13CQ709C8 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VPS13CQ709C8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.5□□□□□ -2.17
VPS13CQ709C8 AL391987.6-201ENST00000305671 199 ntBASIC1.5□□□□□ -2.17
VPS13CQ709C8 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms