Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC58Q4VC31 AC126177.3-201ENST00000551839 688 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC58Q4VC31 AC087481.2-201ENST00000565492 330 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 AC025281.1-201ENST00000567026 265 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 BNIP3P7-201ENST00000605641 516 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 AC067747.1-201ENST00000608026 250 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC58Q4VC31 AL355810.1-201ENST00000614629 552 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 HMGB1P24-202ENST00000615653 685 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC58Q4VC31 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC58Q4VC31 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC58Q4VC31 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CCDC58Q4VC31 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CCDC58Q4VC31 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.15□□□□□ -2.06
CCDC58Q4VC31 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC58Q4VC31 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC58Q4VC31 RNU6-263P-201ENST00000363811 107 ntBASIC2.15□□□□□ -2.07
CCDC58Q4VC31 RNU6-461P-201ENST00000364195 107 ntBASIC2.15□□□□□ -2.07
CCDC58Q4VC31 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CCDC58Q4VC31 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC58Q4VC31 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC58Q4VC31 MTCO3P30-201ENST00000426425 670 ntBASIC2.15□□□□□ -2.07
CCDC58Q4VC31 AL590762.3-201ENST00000436372 640 ntBASIC2.15□□□□□ -2.07
CCDC58Q4VC31 AL645638.1-201ENST00000440519 361 ntBASIC2.15□□□□□ -2.07
CCDC58Q4VC31 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC58Q4VC31 RNF2P1-201ENST00000442955 1010 ntBASIC2.15□□□□□ -2.07
CCDC58Q4VC31 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC58Q4VC31 AC090515.1-201ENST00000465295 476 ntBASIC2.15□□□□□ -2.07
CCDC58Q4VC31 AC104689.1-201ENST00000473356 768 ntBASIC2.15□□□□□ -2.07
CCDC58Q4VC31 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC58Q4VC31 AC022493.1-201ENST00000492984 337 ntBASIC2.15□□□□□ -2.07
CCDC58Q4VC31 AC006445.2-201ENST00000510061 472 ntBASIC2.15□□□□□ -2.07
CCDC58Q4VC31 AP000867.2-201ENST00000532468 320 ntBASIC2.15□□□□□ -2.07
CCDC58Q4VC31 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC58Q4VC31 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC58Q4VC31 MIR3117-201ENST00000584034 78 ntBASIC2.15□□□□□ -2.07
CCDC58Q4VC31 HSPE1P7-201ENST00000604681 321 ntBASIC2.15□□□□□ -2.07
CCDC58Q4VC31 AC005021.1-201ENST00000608730 355 ntBASIC2.15□□□□□ -2.07
CCDC58Q4VC31 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC58Q4VC31 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.15□□□□□ -2.07
CCDC58Q4VC31 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CCDC58Q4VC31 AC244517.1-201ENST00000606030 2086 ntBASIC2.14□□□□□ -2.07
CCDC58Q4VC31 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.14□□□□□ -2.07
CCDC58Q4VC31 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC58Q4VC31 MIR21-201ENST00000362134 72 ntBASIC2.14□□□□□ -2.07
CCDC58Q4VC31 RNU6-859P-201ENST00000362728 107 ntBASIC2.14□□□□□ -2.07
CCDC58Q4VC31 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
CCDC58Q4VC31 AP002784.2-201ENST00000397300 549 ntBASIC2.14□□□□□ -2.07
CCDC58Q4VC31 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.14□□□□□ -2.07
CCDC58Q4VC31 SNORA11B-201ENST00000408175 129 ntBASIC2.14□□□□□ -2.07
CCDC58Q4VC31 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC58Q4VC31 AC105272.1-201ENST00000438604 198 ntBASIC2.14□□□□□ -2.07
CCDC58Q4VC31 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC58Q4VC31 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.14□□□□□ -2.07
CCDC58Q4VC31 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC58Q4VC31 RPL23AP49-201ENST00000492925 468 ntBASIC2.14□□□□□ -2.07
CCDC58Q4VC31 KLRA1P-201ENST00000503499 986 ntBASIC2.14□□□□□ -2.07
CCDC58Q4VC31 SNORA31.8-201ENST00000516327 108 ntBASIC2.14□□□□□ -2.07
CCDC58Q4VC31 MIR514B-201ENST00000516774 80 ntBASIC2.14□□□□□ -2.07
CCDC58Q4VC31 OR4R2P-201ENST00000530815 597 ntBASIC2.14□□□□□ -2.07
CCDC58Q4VC31 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC58Q4VC31 AL049874.4-201ENST00000557593 255 ntBASIC2.14□□□□□ -2.07
CCDC58Q4VC31 AL138976.2-201ENST00000563989 694 ntBASIC2.14□□□□□ -2.07
CCDC58Q4VC31 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
CCDC58Q4VC31 AL159169.3-201ENST00000608871 561 ntBASIC2.14□□□□□ -2.07
CCDC58Q4VC31 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC58Q4VC31 AC016717.2-201ENST00000609089 5141 ntBASIC2.13□□□□□ -2.07
CCDC58Q4VC31 AC009812.4-201ENST00000569134 1805 ntBASIC2.13□□□□□ -2.07
CCDC58Q4VC31 RNU1-51P-201ENST00000365345 176 ntBASIC2.13□□□□□ -2.07
CCDC58Q4VC31 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC58Q4VC31 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC58Q4VC31 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC58Q4VC31 TMEM167AP1-201ENST00000423409 219 ntBASIC2.13□□□□□ -2.07
CCDC58Q4VC31 NAP1L1P3-201ENST00000462291 880 ntBASIC2.13□□□□□ -2.07
CCDC58Q4VC31 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC58Q4VC31 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.13□□□□□ -2.07
CCDC58Q4VC31 AC109329.2-201ENST00000519658 482 ntBASIC2.13□□□□□ -2.07
CCDC58Q4VC31 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC58Q4VC31 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC58Q4VC31 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC58Q4VC31 AC002984.1-201ENST00000591692 448 ntBASIC2.13□□□□□ -2.07
CCDC58Q4VC31 XIAPP1-201ENST00000603162 600 ntBASIC2.13□□□□□ -2.07
CCDC58Q4VC31 SRGNP1-201ENST00000603392 451 ntBASIC2.13□□□□□ -2.07
CCDC58Q4VC31 APOOP1-201ENST00000604695 592 ntBASIC2.13□□□□□ -2.07
CCDC58Q4VC31 AC098657.3-201ENST00000620434 263 ntBASIC2.13□□□□□ -2.07
CCDC58Q4VC31 OR8B1P-202ENST00000641132 1178 ntBASIC2.13□□□□□ -2.07
CCDC58Q4VC31 KPNA2P1-201ENST00000458289 1591 ntBASIC2.13□□□□□ -2.07
CCDC58Q4VC31 AC008669.1-201ENST00000565823 2178 ntBASIC2.13□□□□□ -2.07
CCDC58Q4VC31 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC58Q4VC31 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC58Q4VC31 MIRLET7G-201ENST00000362280 84 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 SNORA38-201ENST00000363946 132 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 RNU6-1243P-201ENST00000364028 107 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 AL513475.1-201ENST00000406602 315 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 RNA5SP56-201ENST00000410277 118 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 COTL1P1-201ENST00000422309 375 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms