Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 IGKV2D-23-201ENST00000518179 286 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.9□□□□□ -1.79
USP41Q3LFD5 AP003385.6-201ENST00000531603 374 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.9□□□□□ -1.79
USP41Q3LFD5 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.9□□□□□ -1.79
USP41Q3LFD5 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.9□□□□□ -1.79
USP41Q3LFD5 AC006116.10-201ENST00000591836 581 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
USP41Q3LFD5 AC110760.3-201ENST00000598794 467 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 AL355812.1-201ENST00000603215 216 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 AC107214.2-201ENST00000608204 634 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 MIR7851-201ENST00000610611 160 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 AC040168.1-201ENST00000623594 991 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 AC009039.2-201ENST00000624524 529 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.9□□□□□ -1.79
USP41Q3LFD5 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
USP41Q3LFD5 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.9□□□□□ -1.79
USP41Q3LFD5 CR381670.1-201ENST00000624291 1693 ntBASIC3.9□□□□□ -1.79
USP41Q3LFD5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.9□□□□□ -1.79
USP41Q3LFD5 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.9□□□□□ -1.79
USP41Q3LFD5 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USP41Q3LFD5 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP41Q3LFD5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USP41Q3LFD5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP41Q3LFD5 ELL2P3-201ENST00000457883 1602 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP41Q3LFD5 RNVU1-14-201ENST00000384770 164 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 TPMTP3-201ENST00000411928 735 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 AC127526.1-201ENST00000417526 366 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 MTCO2P5-201ENST00000422621 426 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 LSM1P1-201ENST00000438629 273 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 ISCA1P2-201ENST00000438679 421 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 AC010655.1-201ENST00000449336 292 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 SUMO2P2-201ENST00000456482 255 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 AC092754.2-201ENST00000463506 460 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 DSTNP2-201ENST00000504533 515 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 AC010625.1-201ENST00000511296 403 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 FTH1P9-201ENST00000513251 355 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 AC103843.2-201ENST00000530523 682 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 AC008011.1-201ENST00000545989 227 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 OR6C73P-201ENST00000546432 358 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 OR6C7P-201ENST00000547875 934 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 AL669831.4-202ENST00000590817 238 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 AF131215.7-201ENST00000602443 707 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 AC103710.4-201ENST00000609301 899 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USP41Q3LFD5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP41Q3LFD5 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USP41Q3LFD5 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 CR383658.2-201ENST00000547576 1525 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.89□□□□□ -1.79
USP41Q3LFD5 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.89□□□□□ -1.79
USP41Q3LFD5 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USP41Q3LFD5 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USP41Q3LFD5 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USP41Q3LFD5 RNU6-28P-201ENST00000362378 107 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 SNORD116-1-201ENST00000384335 95 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 RNA5SP56-201ENST00000410277 118 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 RPL7P8-201ENST00000411964 730 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 AC009237.5-201ENST00000414271 501 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 BX842559.1-201ENST00000419615 532 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 MTND1P30-201ENST00000441241 901 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 AC118469.1-201ENST00000442943 488 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 MTND2P4-201ENST00000445034 1004 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USP41Q3LFD5 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 SNRPGP5-201ENST00000456003 220 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 snoU13.24-201ENST00000458998 104 ntBASIC3.88□□□□□ -1.79
USP41Q3LFD5 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.88□□□□□ -1.79
USP41Q3LFD5 AC023424.2-201ENST00000493479 777 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms