Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AC127391.1-201ENST00000411737 98 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AL161631.1-201ENST00000417933 486 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC233728.2-201ENST00000425348 757 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AL139415.2-201ENST00000431968 163 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 USP9YP15-201ENST00000442391 422 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 MTND1P12-201ENST00000455231 147 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC013267.1-201ENST00000458227 267 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 UQCRHP4-201ENST00000471686 272 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AL139099.1-201ENST00000497398 403 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC019235.1-201ENST00000503847 207 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC010587.1-201ENST00000505809 469 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 PARP4P3-201ENST00000510265 317 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 MTCO1P35-201ENST00000515270 228 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 MRPL49P2-201ENST00000521066 465 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC107934.1-201ENST00000522215 217 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AP003072.2-201ENST00000527756 676 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AP003034.1-201ENST00000534621 422 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 TRAV8-5-201ENST00000537369 341 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC006064.5-201ENST00000541782 248 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 MIR3146-201ENST00000580367 79 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC092954.2-201ENST00000609103 430 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 OR6R2P-201ENST00000609216 300 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC017083.3-201ENST00000609955 700 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AL590282.1-201ENST00000610379 1136 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC023043.4-201ENST00000612081 449 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AL133173.2-201ENST00000614270 90 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AL161637.1-201ENST00000622380 412 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AL732618.1-201ENST00000623251 301 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 AC018529.3-201ENST00000624212 2254 ntBASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PTCHD3Q3KNS1 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC004520.1-201ENST00000608362 1413 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 RNU5E-1-201ENST00000362477 120 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 RNU1-108P-201ENST00000362556 161 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 RNU6-989P-201ENST00000362756 107 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 RNU1-132P-201ENST00000364300 164 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 RNU6-356P-201ENST00000384140 107 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 Y_RNA.493-201ENST00000384422 102 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 EIF4EP1-201ENST00000422311 642 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC073464.1-201ENST00000429823 534 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 RPL31P35-201ENST00000431058 377 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 MTCO2P11-201ENST00000431069 680 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 FCF1P1-201ENST00000432690 571 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC104850.1-201ENST00000435940 476 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AL451074.3-201ENST00000437709 472 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AL512326.1-201ENST00000443050 721 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 snoU13.3-201ENST00000459441 104 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AL121769.1-201ENST00000469473 401 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC041039.1-201ENST00000485656 536 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC007182.2-201ENST00000489251 402 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC091167.1-201ENST00000492017 396 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC104164.2-201ENST00000496953 495 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC108145.1-201ENST00000503770 153 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC107954.1-201ENST00000565906 727 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC234778.2-201ENST00000566241 354 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC092325.1-201ENST00000566449 554 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 MIR4458-201ENST00000578872 75 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 KC877982.1-201ENST00000602313 470 ntBASIC4.16□□□□□ -1.74
PTCHD3Q3KNS1 AC007014.2-201ENST00000615581 479 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms