Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 RPL23AP74-201ENST00000437246 471 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 ATP5C1P1-201ENST00000441945 895 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 AL606517.1-201ENST00000446914 387 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 AC008264.1-201ENST00000447612 367 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 AL009048.1-201ENST00000450437 298 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM23P36406 RPL23AP67-201ENST00000465341 474 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 RPS26P21-201ENST00000475397 348 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 AC108860.1-201ENST00000484521 383 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM23P36406 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
TRIM23P36406 AC021146.5-201ENST00000503544 545 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 AC021678.1-201ENST00000505195 936 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM23P36406 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
TRIM23P36406 OR4P1P-201ENST00000530808 1136 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
TRIM23P36406 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM23P36406 AC005476.1-201ENST00000554427 397 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 AL132657.2-201ENST00000564417 358 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 MTCO3P24-201ENST00000572729 782 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM23P36406 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM23P36406 AC022662.1-201ENST00000580252 331 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM23P36406 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM23P36406 AL109653.1-201ENST00000603091 248 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM23P36406 MIR7112-201ENST00000616126 65 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 MIR3651-201ENST00000630427 90 ntBASIC3.31□□□□□ -1.88
TRIM23P36406 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM23P36406 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
TRIM23P36406 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
TRIM23P36406 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM23P36406 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM23P36406 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM23P36406 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM23P36406 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM23P36406 AC017071.1-201ENST00000564407 2204 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 RNU6-621P-201ENST00000364752 109 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM23P36406 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TRIM23P36406 RNU1-101P-201ENST00000391171 127 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 TAF9BP1-201ENST00000396646 746 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 HMGB3P23-201ENST00000414981 585 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM23P36406 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM23P36406 AC012065.2-201ENST00000421295 375 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM23P36406 RPL23AP83-201ENST00000434984 473 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 Z75741.1-201ENST00000446793 314 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 VN1R10P-201ENST00000447106 875 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 MRPS31P2-201ENST00000451581 518 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 USP9YP34-201ENST00000453983 808 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 snoU109.4-201ENST00000458953 143 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 AC110794.1-201ENST00000505816 425 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM23P36406 APOOP4-201ENST00000513530 597 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
TRIM23P36406 SLC2A13P1-201ENST00000531560 322 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM23P36406 AC126177.3-201ENST00000551839 688 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM23P36406 HSPE1P3-201ENST00000559254 309 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM23P36406 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM23P36406 AC073657.2-201ENST00000605661 303 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 AC055876.5-201ENST00000605667 259 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 AC027449.1-201ENST00000608890 407 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 AC068787.1-201ENST00000623908 691 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 AC010733.2-201ENST00000589496 5702 ntBASIC3.3□□□□□ -1.88
TRIM23P36406 MTCO1P23-201ENST00000415223 1526 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM23P36406 ZNF29P-201ENST00000225587 168 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 SNRPEP3-201ENST00000338402 276 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM23P36406 DEFB109C-201ENST00000382575 264 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 DEFB109B-201ENST00000382656 264 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 RNU6-657P-201ENST00000383904 107 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 AC016769.3-201ENST00000396562 315 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 ARF4P3-201ENST00000397387 509 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 AL450338.1-201ENST00000407987 512 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 RNA5SP80-201ENST00000410475 111 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 RNU6-712P-201ENST00000410558 100 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM23P36406 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM23P36406 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM23P36406 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM23P36406 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM23P36406 AL158071.1-201ENST00000430315 461 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM23P36406 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM23P36406 SNORD11.1-201ENST00000459482 85 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 AC005410.1-202ENST00000460347 485 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 AC092757.1-201ENST00000467293 467 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 HMGN2P13-201ENST00000476476 274 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM23P36406 AC114981.1-201ENST00000503897 678 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 RNA5SP385-201ENST00000515947 110 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms